RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TP53BP2Q13625 1128 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 MLC1Q15049 377 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 ZNHIT3Q15649 155 aaPredicted RBP10.92□□□□□ -0.66
HPS4-214ENST00000485842 INAQ16352 499 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 DPY19L1Q2PZI1 675 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 ZNF791Q3KP31 576 aaPredicted RBP10.92□□□□□ -0.66
HPS4-214ENST00000485842 PRAMEF20Q5VT98 475 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 RPUSD3Q6P087 351 aaKnown RBP10.92□□□□□ -0.66
HPS4-214ENST00000485842 NPSR1Q6W5P4 371 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.92□□□□□ -0.66
HPS4-214ENST00000485842 SLC44A2Q8IWA5 706 aaPredicted RBP10.92□□□□□ -0.66
HPS4-214ENST00000485842 SLC34A3Q8N130 599 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 FAM98AQ8NCA5 519 aaKnown RBP10.92□□□□□ -0.66
HPS4-214ENST00000485842 OR10G3Q8NGC4 313 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 OR8J2Q8NGG1 315 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 OR4A15Q8NGL6 344 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 OR9I1Q8NGQ6 314 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 OR5AK3PQ8NH89 298 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 GRHL3Q8TE85 626 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 OMA1Q96E52 524 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 FAM120BQ96EK7 910 aaKnown RBP10.92□□□□□ -0.66
HPS4-214ENST00000485842 HSPBAP1Q96EW2 488 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 RILPQ96NA2 401 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 MS4A4EQ96PG1 132 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 BTBD9Q96Q07 612 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 TAAR6Q96RI8 345 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 CCDC28BQ9BUN5 200 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 C3orf14Q9HBI5 128 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 NEUROD4Q9HD90 331 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 ASF1BQ9NVP2 202 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 GPR55Q9Y2T6 319 aaPredicted RBP10.92□□□□□ -0.66
HPS4-214ENST00000485842 KLF13Q9Y2Y9 288 aaPredicted RBP10.92□□□□□ -0.66
HPS4-214ENST00000485842 OR10H1Q9Y4A9 318 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 ZNF462Q96JM2 2506 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 EML6Q6ZMW3 1958 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 A0A0G2JMM0 328 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 A0A1W2PPB8 328 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 A0A1W2PRS3 328 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 KIR3DP1A8MWS1 328 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 RNASET2O00584 256 aaKnown RBP10.91□□□□□ -0.66
HPS4-214ENST00000485842 TP53I11O14683 189 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 ACOX3O15254 700 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 PEX1O43933 1283 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 REM1O75628 298 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 PPM1BO75688 479 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 PSMG1O95456 288 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 P04436 131 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 DRD5P21918 477 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 KRT20P35900 424 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 RFC3P40938 356 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 CCT3P49368 545 aaKnown RBP10.91□□□□□ -0.66
HPS4-214ENST00000485842 MEOX1P50221 254 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 FBXW4P57775 412 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 HBA1P69905 142 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 PHC1P78364 1004 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 ANXA8L1Q5VT79 327 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 PAOXQ6QHF9 649 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 SULF2Q8IWU5 870 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 DND1Q8IYX4 353 aaKnown RBP10.91□□□□□ -0.66
HPS4-214ENST00000485842 MIER2Q8N344 545 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 CPSF7Q8N684 471 aaKnown RBP10.91□□□□□ -0.66
HPS4-214ENST00000485842 GOLM1Q8NBJ4 401 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 VPS37AQ8NEZ2 397 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 SLC9A6Q92581 669 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 JADE3Q92613 823 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 TMBIM1Q969X1 311 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 OTUB1Q96FW1 271 aaPredicted RBP10.91□□□□□ -0.66
HPS4-214ENST00000485842 CHMP6Q96FZ7 201 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 SGCZQ96LD1 299 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 SIKE1Q9BRV8 207 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 YIPF4Q9BSR8 244 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 TMEM120AQ9BXJ8 343 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 CCDC134Q9H6E4 229 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 SDR39U1Q9NRG7 319 aaPredicted RBP10.91□□□□□ -0.66
HPS4-214ENST00000485842 SACM1LQ9NTJ5 587 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 DEPPQ9NTK1 212 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 FAM120CQ9NX05 1096 aaKnown RBP10.91□□□□□ -0.66
HPS4-214ENST00000485842 ZIM2Q9NZV7 527 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 PCDHGB4Q9UN71 923 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 PCDHGB6Q9Y5F9 930 aa10.91□□□□□ -0.66
HPS4-214ENST00000485842 NUP214P35658 2090 aaPredicted RBP10.91□□□□□ -0.66
HPS4-214ENST00000485842 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 RNF103-CHMP3A0A140T963 221 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 CAPN14A8MX76 684 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 KLRC4-KLRK1H3BQV0 150 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 TO15178 435 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 CRYABP02511 175 aaKnown RBP10.9□□□□□ -0.66
HPS4-214ENST00000485842 PGRP06401 933 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 CT45A8P0DMV1 189 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 CT45A9P0DMV2 189 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 ACP2P11117 423 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 PLA2G2AP14555 144 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 NCF2P19878 526 aaPredicted RBP10.9□□□□□ -0.66
HPS4-214ENST00000485842 IL12BP29460 328 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 PIGAP37287 484 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 RFX3P48380 749 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 DNASE1L1P49184 302 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 PSG6Q00889 435 aa10.9□□□□□ -0.66
HPS4-214ENST00000485842 LASP1Q14847 261 aaKnown RBP10.9□□□□□ -0.66
HPS4-214ENST00000485842 IGFBP7Q16270 282 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms