RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 WDSUB1Q8N9V3 476 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 UHMK1Q8TAS1 419 aaKnown RBP17.51■□□□□ 0.39
COL27A1-205ENST00000485397 ZPLD1Q8TCW7 415 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 TUBA1CQ9BQE3 449 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 MRPL46Q9H2W6 279 aaKnown RBP17.51■□□□□ 0.39
COL27A1-205ENST00000485397 ANKRA2Q9H9E1 313 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 BRF2Q9HAW0 419 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 JKAMPQ9P055 326 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 HEY2Q9UBP5 337 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 PSME2Q9UL46 239 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 SNX6Q9UNH7 406 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 EXO1Q9UQ84 846 aaKnown RBP17.51■□□□□ 0.39
COL27A1-205ENST00000485397 PRAMEF25A6NGN4 478 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 IL18BPO95998 194 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 RHOXF2BP0C7M4 288 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 TMIGD3P0DMS9 266 aaPredicted RBP17.5■□□□□ 0.39
COL27A1-205ENST00000485397 CHN1P15882 459 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 DRD5P21918 477 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 PPICP45877 212 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 SNTA1Q13424 505 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 KRTAP21-3Q3LHN1 58 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 FBXW10Q5XX13 1052 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 PAMR1Q6UXH9 720 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 TAOK1Q7L7X3 1001 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 TRIM42Q8IWZ5 723 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 OR14L1PQ8NHC6 308 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 DCAKDQ8WVC6 231 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 TMBIM1Q969X1 311 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 FAIM2Q9BWQ8 316 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 C1QTNF3Q9BXJ4 246 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 OR2B2Q9GZK3 357 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 PRODH2Q9UF12 536 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 TRPS1Q9UHF7 1281 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 DMGDHQ9UI17 866 aaKnown RBP17.5■□□□□ 0.39
COL27A1-205ENST00000485397 UTS2RQ9UKP6 389 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 EDARQ9UNE0 448 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 ZNF780BQ9Y6R6 833 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 DOCK7Q96N67 2140 aa17.5■□□□□ 0.39
COL27A1-205ENST00000485397 ZNF469Q96JG9 3925 aaPredicted RBP17.49■□□□□ 0.39
COL27A1-205ENST00000485397 TO15178 435 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 REM1O75628 298 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 CBR3O75828 277 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 ESRRBO95718 433 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 CPN1P15169 458 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 GCKP35557 465 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 HSD17B3P37058 310 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 STARP49675 285 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 DCAF7P61962 342 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 TRA2BP62995 288 aaKnown RBP17.49■□□□□ 0.39
COL27A1-205ENST00000485397 CLCQ05315 142 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 TEX35Q5T0J7 233 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 CCDC116Q8IYX3 515 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 CDYL2Q8N8U2 506 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 ALPK1Q96QP1 1244 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 PFDN4Q9NQP4 134 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 NMRK1Q9NWW6 199 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 VPS29Q9UBQ0 182 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 GPR55Q9Y2T6 319 aaPredicted RBP17.49■□□□□ 0.39
COL27A1-205ENST00000485397 ACANP16112 2415 aa17.49■□□□□ 0.39
COL27A1-205ENST00000485397 FRG2CA6NGY1 282 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 H0Y3Z8 333 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 MANBAO00462 879 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 SORDQ00796 357 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 HMGCS1Q01581 520 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 UNC50Q53HI1 259 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 ZNF628Q5EBL2 1059 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 LUZP2Q86TE4 346 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 IFT81Q8WYA0 676 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 KAT2AQ92830 837 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 MBD6Q96DN6 1003 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 COL21A1Q96P44 957 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 G6PC3Q9BUM1 346 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 RBM24Q9BX46 236 aaKnown RBP17.48■□□□□ 0.39
COL27A1-205ENST00000485397 GSX1Q9H4S2 264 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-205ENST00000485397 ZNF180Q9UJW8 692 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 FBXL2Q9UKC9 423 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 DLGAP4Q9Y2H0 992 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 NF1P21359 2839 aa17.48■□□□□ 0.39
COL27A1-205ENST00000485397 OR6C70A6NIJ9 312 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 CLCA1A8K7I4 914 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 ERN1O75460 977 aaKnown RBP17.47■□□□□ 0.39
COL27A1-205ENST00000485397 RCBTB2O95199 551 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 ATE1O95260 518 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 RAF1P04049 648 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 IL3P08700 152 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 GFRA1P56159 465 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 ADAM8P78325 824 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 RAE1P78406 368 aaKnown RBP17.47■□□□□ 0.39
COL27A1-205ENST00000485397 OR5M10Q6IEU7 315 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 ENPP6Q6UWR7 440 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 CAMKMTQ7Z624 323 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 ADGRE4PQ86SQ3 457 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 PLCZ1Q86YW0 608 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 OR9A2Q8NGT5 310 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 ZNF675Q8TD23 568 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 EXOSC8Q96B26 276 aaKnown RBP17.47■□□□□ 0.39
COL27A1-205ENST00000485397 INTS12Q96CB8 462 aaKnown RBP17.47■□□□□ 0.39
COL27A1-205ENST00000485397 TMCO6Q96DC7 493 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 ADOQ96SZ5 270 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 FMO2Q99518 471 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms