RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PPM1BO75688 479 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 P04436 131 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 ABCB1P08183 1280 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-213ENST00000485080 ALDOCP09972 364 aaKnown RBP16.36■□□□□ 0.21
SREBF1-213ENST00000485080 CCL3P10147 92 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 KITP10721 976 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 MST1P26927 711 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 EPHA3P29320 983 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 MAP3K8P41279 467 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 MEOX1P50221 254 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 SRSF11Q05519 484 aaKnown RBP16.36■□□□□ 0.21
SREBF1-213ENST00000485080 FOXO1Q12778 655 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 HSPB3Q12988 150 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 DPY19L1Q2PZI1 675 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 LSM12Q3MHD2 195 aaKnown RBP16.36■□□□□ 0.21
SREBF1-213ENST00000485080 TBCELQ5QJ74 424 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 EPGNQ6UW88 154 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 GK5Q6ZS86 529 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 NUP54Q7Z3B4 507 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 SLC34A3Q8N130 599 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 CPSF7Q8N684 471 aaKnown RBP16.36■□□□□ 0.21
SREBF1-213ENST00000485080 OR2M7Q8NG81 312 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 OR10G3Q8NGC4 313 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 STON2Q8WXE9 905 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 FAM173AQ9BQD7 235 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 LMF2Q9BU23 707 aaKnown RBP16.36■□□□□ 0.21
SREBF1-213ENST00000485080 DPY30Q9C005 99 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 WDR55Q9H6Y2 383 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-213ENST00000485080 PROK2Q9HC23 129 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 SLCO1B3Q9NPD5 702 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 MED4Q9NPJ6 270 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 AIG1Q9NVV5 245 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 CNOT11Q9UKZ1 510 aaKnown RBP16.36■□□□□ 0.21
SREBF1-213ENST00000485080 GPR45Q9Y5Y3 372 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 USH1CQ9Y6N9 552 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 EML6Q6ZMW3 1958 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 EXPH5Q8NEV8 1989 aa16.36■□□□□ 0.21
SREBF1-213ENST00000485080 NINQ8N4C6 2090 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 A0A1W2PRB8 838 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 CLEC18AA5D8T8 446 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 ANKUB1A6NFN9 424 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 OR6C70A6NIJ9 312 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 GLSO94925 669 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-213ENST00000485080 ZNF24P17028 368 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 GPC1P35052 558 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 CDK9P50750 372 aaKnown RBP16.35■□□□□ 0.21
SREBF1-213ENST00000485080 CLNS1AP54105 237 aaKnown RBP16.35■□□□□ 0.21
SREBF1-213ENST00000485080 RPP38P78345 283 aaKnown RBP16.35■□□□□ 0.21
SREBF1-213ENST00000485080 PSG6Q00889 435 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 ALDH6A1Q02252 535 aaKnown RBP16.35■□□□□ 0.21
SREBF1-213ENST00000485080 CYP27C1Q4G0S4 372 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 SLC9B1Q4ZJI4 515 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 RNFT1Q5M7Z0 435 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 ZCCHC12Q6PEW1 402 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 CLEC18BQ6UXF7 455 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 NPSR1Q6W5P4 371 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 TMEM64Q6YI46 380 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 CLEC18CQ8NCF0 446 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 SPPL2AQ8TCT8 520 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 SLC35A4Q96G79 324 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 DUSP26Q9BV47 211 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 CLMPQ9H6B4 373 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 C3orf14Q9HBI5 128 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 NEUROD4Q9HD90 331 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 SIRT3Q9NTG7 399 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-213ENST00000485080 DOPEY1Q5JWR5 2465 aa16.35■□□□□ 0.21
SREBF1-213ENST00000485080 DNAJC13O75165 2243 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 COL12A1Q99715 3063 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 PYCARD-AS1I3L0S3 204 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 RNASET2O00584 256 aaKnown RBP16.34■□□□□ 0.21
SREBF1-213ENST00000485080 EMC8O43402 210 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 IDO1P14902 403 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 GNLYP22749 145 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 WNT3P56703 355 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 CORO7P57737 925 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 FBXW4P57775 412 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 EXOSC6Q5RKV6 272 aaKnown RBP16.34■□□□□ 0.21
SREBF1-213ENST00000485080 ARFGAP2Q8N6H7 521 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 FAM13CQ8NE31 585 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 HGDQ93099 445 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 OMA1Q96E52 524 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 GIMAP5Q96F15 307 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 GPR137Q96N19 417 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 IL1RL2Q9HB29 575 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 ZNF407Q9C0G0 2248 aa16.34■□□□□ 0.21
SREBF1-213ENST00000485080 SPTBN1Q01082 2364 aaKnown RBP16.34■□□□□ 0.21
SREBF1-213ENST00000485080 USP9YO00507 2555 aaPredicted RBP16.33■□□□□ 0.21
SREBF1-213ENST00000485080 GTF3C1Q12789 2109 aa16.33■□□□□ 0.21
SREBF1-213ENST00000485080 PTPN13Q12923 2485 aa16.33■□□□□ 0.2
SREBF1-213ENST00000485080 A0A0G2JMM0 328 aa16.33■□□□□ 0.2
SREBF1-213ENST00000485080 GOLGA8QA0A0J9YX86 632 aa16.33■□□□□ 0.2
SREBF1-213ENST00000485080 A0A1W2PPB8 328 aa16.33■□□□□ 0.2
SREBF1-213ENST00000485080 A0A1W2PRS3 328 aa16.33■□□□□ 0.2
SREBF1-213ENST00000485080 PINLYPA6NC86 204 aa16.33■□□□□ 0.2
SREBF1-213ENST00000485080 GOLGA8OA6NCC3 632 aa16.33■□□□□ 0.2
SREBF1-213ENST00000485080 KIR3DP1A8MWS1 328 aa16.33■□□□□ 0.2
SREBF1-213ENST00000485080 GOLGA8NF8WBI6 632 aa16.33■□□□□ 0.2
SREBF1-213ENST00000485080 TSPAN2O60636 221 aa16.33■□□□□ 0.2
SREBF1-213ENST00000485080 SCN2BO60939 215 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms