RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 OR13F1Q8NGS4 319 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 APH1BQ8WW43 257 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 PRRC1Q96M27 445 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 CD180Q99467 661 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 ARHGDIGQ99819 225 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 PIGUQ9H490 435 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 CXorf21Q9HAI6 301 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 MAT2BQ9NZL9 334 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 PLCL2Q9UPR0 1127 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 MGAT4BQ9UQ53 548 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 TPRKBQ9Y3C4 175 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 CSNK1G3Q9Y6M4 447 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 DNAH14Q0VDD8 3507 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 KNL1Q8NG31 2342 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 BLACEA4D250 179 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 XPNPEP2O43895 674 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 SDC3O75056 442 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 NME6O75414 186 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-225ENST00000483495 SEC14L2O76054 403 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 MED26O95402 600 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 SLC35E2P0CK97 266 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 ACP2P11117 423 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 DCKP27707 260 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 FMO3P31513 532 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 SLC5A2P31639 672 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 PEX19P40855 299 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 MAP3K8P41279 467 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 PDX1P52945 283 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 DMWDQ09019 674 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 LSAMPQ13449 338 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 PIN1Q13526 163 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-225ENST00000483495 TUBA3CQ13748 450 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 NPTX1Q15818 432 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 NEDD8Q15843 81 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 DUSP5Q16690 384 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 ZNF311Q5JNZ3 666 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 MLIPQ5VWP3 458 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 GTF2IRD2BQ6EKJ0 949 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 KLHL17Q6TDP4 642 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 Q6ZPB1 254 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-225ENST00000483495 WDR53Q7Z5U6 358 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-225ENST00000483495 GTF2IRD2Q86UP8 949 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 ZNF420Q8TAQ5 688 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-225ENST00000483495 ADAMTS18Q8TE60 1221 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 NR4A3Q92570 626 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 HOXB13Q92826 284 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-225ENST00000483495 CDS1Q92903 461 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 ZG16BQ96DA0 208 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 NODALQ96S42 347 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 STACQ99469 402 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 DOK1Q99704 481 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 QRSL1Q9H0R6 528 aaKnown RBP12.38□□□□□ -0.43
CPNE1-225ENST00000483495 MTHFD2LQ9H903 347 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-225ENST00000483495 PRDM6Q9NQX0 595 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 ENAMQ9NRM1 1142 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 DUSP22Q9NRW4 184 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 SATB2Q9UPW6 733 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 RNF6Q9Y252 685 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 CHST2Q9Y4C5 530 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 A0A0A6YYC8 382 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-225ENST00000483495 IGHV5-51A0A0C4DH38 117 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 SH3PXD2BA1X283 911 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 FITM1A5D6W6 292 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 RHPN2P1A8MT19 583 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 I3L1I5 382 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-225ENST00000483495 FCMRO60667 390 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 UGT2B17O75795 530 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 NSA2O95478 260 aaKnown RBP12.37□□□□□ -0.43
CPNE1-225ENST00000483495 RNH1P13489 461 aaKnown RBP12.37□□□□□ -0.43
CPNE1-225ENST00000483495 NT5EP21589 574 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 PCMT1P22061 227 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 MLLT3P42568 568 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-225ENST00000483495 GFERP55789 205 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 HPCAP84074 193 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 FGD3Q5JSP0 725 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 AP1ARQ63HQ0 302 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 TYW3Q6IPR3 259 aaKnown RBP12.37□□□□□ -0.43
CPNE1-225ENST00000483495 CARFQ8N187 725 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 LINC00471Q8N535 108 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 CDRT4Q8N9R6 151 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 RHOXF1Q8NHV9 184 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 SLC7A13Q8TCU3 470 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 SLC9A6Q92581 669 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 UBE2FQ969M7 185 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 GTPBP3Q969Y2 492 aaKnown RBP12.37□□□□□ -0.43
CPNE1-225ENST00000483495 ISOC1Q96CN7 298 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 ZDHHC12Q96GR4 267 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 TGM7Q96PF1 710 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 DGCR6LQ9BY27 220 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 TRIM45Q9H8W5 580 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-225ENST00000483495 FANCEQ9HB96 536 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 MAN2C1Q9NTJ4 1040 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 PLCXD1Q9NUJ7 323 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 SCN3BQ9NY72 215 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 FTSJ1Q9UET6 329 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 CLCA2Q9UQC9 943 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 IFT52Q9Y366 437 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 RNF215Q9Y6U7 377 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 GON4LQ3T8J9 2241 aa12.37□□□□□ -0.43
CPNE1-225ENST00000483495 CCDC163A0A0D9SF12 145 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms