RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ZNF592Q92610 1267 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 TMBIM1Q969X1 311 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 C18orf12Q96KH6 178 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 PIGQQ9BRB3 760 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 NEUROD4Q9HD90 331 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 C6orf203Q9P0P8 240 aaPredicted RBP12.63□□□□□ -0.39
VARS-226ENST00000483275 CLCF1Q9UBD9 225 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 CES1P1Q9UKY3 287 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 PCDHA9Q9Y5H5 950 aa12.63□□□□□ -0.39
VARS-226ENST00000483275 DSCAMO60469 2012 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 CSPG4Q6UVK1 2322 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 KIF2AO00139 706 aaPredicted RBP12.62□□□□□ -0.39
VARS-226ENST00000483275 PLOD2O00469 737 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 URI1O94763 535 aaPredicted RBP12.62□□□□□ -0.39
VARS-226ENST00000483275 TGM6O95932 706 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 IL18BPO95998 194 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 ACTL6AO96019 429 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 PDYNP01213 254 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 TYK2P29597 1187 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 DEKP35659 375 aaKnown RBP12.62□□□□□ -0.39
VARS-226ENST00000483275 LHX2P50458 406 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 CORO7P57737 925 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 NKX6-1P78426 367 aaPredicted RBP12.62□□□□□ -0.39
VARS-226ENST00000483275 SLC7A5Q01650 507 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 GUCY2DQ02846 1103 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 GALNT1Q10472 559 aaPredicted RBP12.62□□□□□ -0.39
VARS-226ENST00000483275 IFT88Q13099 833 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 SF3B4Q15427 424 aaKnown RBP eCLIP12.62□□□□□ -0.393e-8■■■■□ 26.4
VARS-226ENST00000483275 SLC30A6Q6NXT4 461 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 LETMD1Q6P1Q0 360 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 IFNEQ86WN2 208 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 GRAMD2AQ8IUY3 354 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 METTL4Q8N3J2 472 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 C17orf47Q8NEP4 570 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 OR4F6Q8NGB9 312 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 ZPLD1Q8TCW7 415 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 KAT2AQ92830 837 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 CNRIP1Q96F85 164 aaPredicted RBP12.62□□□□□ -0.39
VARS-226ENST00000483275 LCORQ96JN0 433 aaPredicted RBP12.62□□□□□ -0.39
VARS-226ENST00000483275 SFXN3Q9BWM7 321 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 OR2B2Q9GZK3 357 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 ZNF395Q9H8N7 513 aaPredicted RBP12.62□□□□□ -0.39
VARS-226ENST00000483275 TAS2R10Q9NYW0 307 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 XPR1Q9UBH6 696 aa12.62□□□□□ -0.39
VARS-226ENST00000483275 UTP11Q9Y3A2 253 aaKnown RBP12.62□□□□□ -0.39
VARS-226ENST00000483275 TNPO3Q9Y5L0 923 aaKnown RBP12.62□□□□□ -0.39
VARS-226ENST00000483275 RAI1Q7Z5J4 1906 aaPredicted RBP12.61□□□□□ -0.39
VARS-226ENST00000483275 A0A1W2PNV4 684 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 GOLGA6L10A6NI86 522 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 REM1O75628 298 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 SMNDC1O75940 238 aaKnown RBP eCLIP12.61□□□□□ -0.394e-7■■■□□ 17.2
VARS-226ENST00000483275 RCBTB2O95199 551 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 ATP1B1P05026 303 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 CPN1P15169 458 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 GCKP35557 465 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 EMDP50402 254 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 CDH13P55290 713 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 GFRA1P56159 465 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 CLDN18P56856 261 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 MAP4K2Q12851 820 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 Q5PR19 223 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 VWA1Q6PCB0 445 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 NPSR1Q6W5P4 371 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 PAGE2Q7Z2X7 111 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 NUP54Q7Z3B4 507 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 ADGRE4PQ86SQ3 457 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 UBQLNLQ8IYU4 475 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 C1orf52Q8N6N3 182 aaKnown RBP12.61□□□□□ -0.39
VARS-226ENST00000483275 TM4SF18Q96CE8 201 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 SFXN2Q96NB2 322 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 DACH2Q96NX9 599 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 ADOQ96SZ5 270 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 ELOVL6Q9H5J4 265 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 PFDN4Q9NQP4 134 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 KLHL28Q9NXS3 571 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 HEY2Q9UBP5 337 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 ZNF639Q9UID6 485 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 DKKL1Q9UK85 242 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 EXO1Q9UQ84 846 aaKnown RBP12.61□□□□□ -0.39
VARS-226ENST00000483275 TESMINQ9Y4I5 508 aa12.61□□□□□ -0.39
VARS-226ENST00000483275 PRR14LQ5THK1 2151 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 C1orf226A1L170 272 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 H0YC42 278 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 SMAD7O15105 426 aaKnown RBP12.6□□□□□ -0.39
VARS-226ENST00000483275 TNFSF13O75888 250 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 LY6G6DO95868 133 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 RHOXF2BP0C7M4 288 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 CTAGE8P0CG41 777 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 CHN1P15882 459 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 CSNK2A2P19784 350 aaPredicted RBP12.6□□□□□ -0.39
VARS-226ENST00000483275 CCKARP32238 428 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 TPD52P55327 224 aaPredicted RBP12.6□□□□□ -0.39
VARS-226ENST00000483275 SIRPAP78324 504 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 HMGCS1Q01581 520 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 FAM27E3Q08E93 113 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 MILR1Q7Z6M3 343 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 CTAGE4Q8IX94 777 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 CNEP1R1Q8N9A8 125 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 OR9A2Q8NGT5 310 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms