RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 USB1Q9BQ65 265 aaKnown RBP9.11□□□□□ -0.95
VEGFA-212ENST00000480614 CENPOQ9BU64 300 aa9.11□□□□□ -0.95
VEGFA-212ENST00000480614 TMEM98Q9Y2Y6 226 aa9.11□□□□□ -0.95
VEGFA-212ENST00000480614 SDK2Q58EX2 2172 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 HYAL2Q12891 473 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 TMEM173Q86WV6 379 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SYNPOQ8N3V7 929 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 LIN37Q96GY3 246 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SLC6A14Q9UN76 642 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF541Q9H0D2 1346 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 MTX2O75431 263 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 IL1R2P27930 398 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 TAS2R38P59533 333 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 RTL6Q6ICC9 239 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SHFQ7M4L6 423 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 ACBD4Q8NC06 268 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 OR7G2Q8NG99 324 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 PITPNBP48739 271 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 DAP3P51398 398 aaKnown RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 HNRNPKP61978 463 aaKnown RBP eCLIP9.1□□□□□ -0.958e-7■■■■□ 22.8
VEGFA-212ENST00000480614 RCAN2Q14206 197 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 CCDC58Q4VC31 144 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 ATAD3CQ5T2N8 411 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 NANOGP8Q6NSW7 305 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 IL22RA1Q8N6P7 574 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 NAXEQ8NCW5 288 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 ESAMQ96AP7 390 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 NANOGQ9H9S0 305 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 GPN2Q9H9Y4 310 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SCML1Q9UN30 329 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SHOXO15266 292 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 ADORA3P0DMS8 318 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 CDKN2CP42773 168 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 NPRL3Q12980 569 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 CATSPEREQ5SY80 951 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 MARVELD2Q8N4S9 558 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 OR52P1PQ8NH57 321 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 C8orf33Q9H7E9 229 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SARDHQ9UL12 918 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 MPDZO75970 2070 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 GLOD5A6NK44 160 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 HTRA2O43464 458 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 DLX2Q07687 328 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF616Q08AN1 781 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 PCBP2Q15366 365 aaKnown RBP eCLIP9.1□□□□□ -0.951e-10■■□□□ 11.4
VEGFA-212ENST00000480614 CES4AQ5XG92 561 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 PHTF2Q8N3S3 785 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 CNOT11Q9UKZ1 510 aaKnown RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 CFAP20Q9Y6A4 193 aaKnown RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 TMEM233B4DJY2 109 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 LEFTY1O75610 366 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SEC14L2O76054 403 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SYPP08247 313 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 PCLAFQ15004 111 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 UGT8Q16880 541 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 LILRB2Q8N423 598 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 INPP5EQ9NRR6 644 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 FAM53CQ9NYF3 392 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 FBXO7Q9Y3I1 522 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 TIMM8BQ9Y5J9 83 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 ST14Q9Y5Y6 855 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 ANKRD31Q8N7Z5 1873 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 PHRF1Q9P1Y6 1649 aaKnown RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 PRAMEF2O60811 474 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 LILRB3O75022 631 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 CNTN5O94779 1100 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 RAB8AP61006 207 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 C6orf141Q5SZD1 244 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 TBC1D15Q8TC07 691 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SFXN5Q8TD22 340 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 IMP4Q96G21 291 aaKnown RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SPATA6Q9NWH7 488 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SLC34A2O95436 690 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 HNRNPFP52597 415 aaKnown RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SUSD1Q6UWL2 747 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 OR4K1Q8NGD4 311 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 TRUB1Q8WWH5 349 aaKnown RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 WDR6Q9NNW5 1121 aaKnown RBP9.1□□□□□ -0.95
VEGFA-212ENST00000480614 PLAGL1Q9UM63 463 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 KDM3BQ7LBC6 1761 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 J3KR12 359 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 TOR1AO14656 332 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 PRAF2O60831 178 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SOX2P48431 317 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 TCEAL1Q15170 157 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 SLC7A13Q8TCU3 470 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 FOXO6A8MYZ6 492 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 TAS2R20P59543 309 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 TGFBR3Q03167 851 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 LANCL3Q6ZV70 420 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 APMAPQ9HDC9 416 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 GKN1Q9NS71 199 aa9.1□□□□□ -0.95
VEGFA-212ENST00000480614 RNF212BA8MTL3 300 aa9.09□□□□□ -0.95
VEGFA-212ENST00000480614 C11orf98E9PRG8 122 aa9.09□□□□□ -0.95
VEGFA-212ENST00000480614 MSR1P21757 451 aa9.09□□□□□ -0.95
VEGFA-212ENST00000480614 RAB4BP61018 213 aa9.09□□□□□ -0.95
VEGFA-212ENST00000480614 MEF2DQ14814 521 aa9.09□□□□□ -0.95
VEGFA-212ENST00000480614 EMC10Q5UCC4 262 aa9.09□□□□□ -0.95
VEGFA-212ENST00000480614 GRASPQ7Z6J2 395 aaPredicted RBP9.09□□□□□ -0.95
VEGFA-212ENST00000480614 TXNDC15Q96J42 360 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms