RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 PFDN4Q9NQP4 134 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 NMRK1Q9NWW6 199 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 VPS29Q9UBQ0 182 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 UTS2RQ9UKP6 389 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 ZNF780BQ9Y6R6 833 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 MPDZO75970 2070 aa17.16■□□□□ 0.34
ABCF3-214ENST00000480562 PRAMEF25A6NGN4 478 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 EEF1E1-BLOC1S5C9J1V9 151 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 ACOX3O15254 700 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 EEF1E1O43324 174 aaKnown RBP17.15■□□□□ 0.34
ABCF3-214ENST00000480562 ACTL6AO96019 429 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 CD99P14209 185 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 DRD5P21918 477 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 CTSSP25774 331 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 PPICP45877 212 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 UNC50Q53HI1 259 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 TMEM81Q6P7N7 255 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 WDSUB1Q8N9V3 476 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 LINC01560Q8TB33 94 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 TMBIM1Q969X1 311 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 TMUB1Q9BVT8 246 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 CXXC4Q9H2H0 198 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 CALHM2Q9HA72 323 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 PRODH2Q9UF12 536 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 FETUBQ9UGM5 382 aa17.15■□□□□ 0.34
ABCF3-214ENST00000480562 FOXD3Q9UJU5 478 aaPredicted RBP17.15■□□□□ 0.34
ABCF3-214ENST00000480562 ABCA4P78363 2273 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 DOCK7Q96N67 2140 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 A0A087WUV0 522 aaPredicted RBP17.14■□□□□ 0.33
ABCF3-214ENST00000480562 FRG2CA6NGY1 282 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 TUBAL3A6NHL2 446 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 SUPT7LO94864 414 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 IL3P08700 152 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 SNRPAP09012 282 aaKnown RBP17.14■□□□□ 0.33
ABCF3-214ENST00000480562 RHOXF2BP0C7M4 288 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 CYP4B1P13584 511 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 DCAF7P61962 342 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 TRA2BP62995 288 aaKnown RBP17.14■□□□□ 0.33
ABCF3-214ENST00000480562 SRYQ05066 204 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 RCAN2Q14206 197 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 ZNF628Q5EBL2 1059 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 PLXDC2Q6UX71 529 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 CCDC116Q8IYX3 515 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 OR14L1PQ8NHC6 308 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 ZPLD1Q8TCW7 415 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 KAT2AQ92830 837 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 EXOSC8Q96B26 276 aaKnown RBP17.14■□□□□ 0.33
ABCF3-214ENST00000480562 TUBA1CQ9BQE3 449 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 TMEM216Q9P0N5 145 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 EXO1Q9UQ84 846 aaKnown RBP17.14■□□□□ 0.33
ABCF3-214ENST00000480562 DLGAP4Q9Y2H0 992 aa17.14■□□□□ 0.33
ABCF3-214ENST00000480562 GPR55Q9Y2T6 319 aaPredicted RBP17.14■□□□□ 0.33
ABCF3-214ENST00000480562 ZNF469Q96JG9 3925 aaPredicted RBP17.14■□□□□ 0.33
ABCF3-214ENST00000480562 H0Y3Z8 333 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 REM1O75628 298 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 KRT6AP02538 564 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 KRT6BP04259 564 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 TMIGD3P0DMS9 266 aaPredicted RBP17.13■□□□□ 0.33
ABCF3-214ENST00000480562 DNASE1P24855 282 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 OPRM1P35372 400 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 GCKP35557 465 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 KRT6CP48668 564 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 DGKQP52824 942 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 RAE1P78406 368 aaKnown RBP17.13■□□□□ 0.33
ABCF3-214ENST00000480562 FOXF2Q12947 444 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 SNTA1Q13424 505 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 DAZAP2Q15038 168 aaPredicted RBP17.13■□□□□ 0.33
ABCF3-214ENST00000480562 RASA2Q15283 850 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 ZNF678Q5SXM1 525 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 GPRIN3Q6ZVF9 776 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 TGIF2LYQ8IUE0 185 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 TRIM42Q8IWZ5 723 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 OR9A2Q8NGT5 310 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 ZNF592Q92610 1267 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 COL21A1Q96P44 957 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 TMEM237Q96Q45 408 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 OR2B2Q9GZK3 357 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 MCM8Q9UJA3 840 aa17.13■□□□□ 0.33
ABCF3-214ENST00000480562 ACANP16112 2415 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 EXOC1LA0A1B0GW35 172 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 GNG14A0A1W2PPG7 69 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 TO15178 435 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 PCDH7O60245 1069 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 DLX3O60479 287 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 CBR3O75828 277 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 IL18BPO95998 194 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 EPXP11678 715 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 HSD3B1P14060 373 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 CPN1P15169 458 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 TAC1P20366 129 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 TCEA1P23193 301 aaKnown RBP17.12■□□□□ 0.33
ABCF3-214ENST00000480562 HSD3B2P26439 372 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 STARP49675 285 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 HTR6P50406 440 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 CORO7P57737 925 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 HMGCS1Q01581 520 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 FBXW10Q5XX13 1052 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 KIF18BQ86Y91 864 aa17.12■□□□□ 0.33
ABCF3-214ENST00000480562 CHDHQ8NE62 594 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-214ENST00000480562 METTL6Q8TCB7 284 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms