RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 TP53TG5Q9Y2B4 290 aa11.31□□□□□ -0.6
TRA2B-212ENST00000480461 GPR55Q9Y2T6 319 aaPredicted RBP11.31□□□□□ -0.6
TRA2B-212ENST00000480461 CRYBG3Q68DQ2 2970 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 C2orf92A0A1B0GVN3 265 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 OR6C76A6NM76 312 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 FBP2O00757 339 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 CFLARO15519 480 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 DYRK3O43781 588 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 WDPCPO95876 746 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 FAM107AO95990 144 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 IFI6P09912 130 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 CT45A8P0DMV1 189 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 CT45A9P0DMV2 189 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 HOXB9P17482 250 aaPredicted RBP11.3□□□□□ -0.6
TRA2B-212ENST00000480461 GPC1P35052 558 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 CD96P40200 585 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 CCT3P49368 545 aaKnown RBP11.3□□□□□ -0.6
TRA2B-212ENST00000480461 PRKAG1P54619 331 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 STX1BP61266 288 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 MFAP5Q13361 173 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 GAB1Q13480 694 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 DPY19L1Q2PZI1 675 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 GTDC1Q4AE62 458 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 TIGD2Q4W5G0 525 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 CT45A2Q5DJT8 189 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 ZNF787Q6DD87 383 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 DESI1Q6ICB0 168 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 IGFL3Q6UXB1 125 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 ISLR2Q6UXK2 745 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 RETREG3Q86VR2 466 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 TREML1Q86YW5 311 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 NUP43Q8NFH3 380 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 OR4N2Q8NGD1 307 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 OR5AK3PQ8NH89 298 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 ZFP28Q8NHY6 868 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 NUBPLQ8TB37 319 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 HOXB13Q92826 284 aaPredicted RBP11.3□□□□□ -0.6
TRA2B-212ENST00000480461 SPDL1Q96EA4 605 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 ART5Q96L15 291 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 ZNF354BQ96LW1 612 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 CCDC106Q9BWC9 280 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 ITPAQ9BY32 194 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 SERHL2Q9H4I8 314 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 FOLH1BQ9HBA9 442 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 GPATCH2Q9NW75 528 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 TMEM45AQ9NWC5 275 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 FAM120CQ9NX05 1096 aaKnown RBP11.3□□□□□ -0.6
TRA2B-212ENST00000480461 ANKRD10Q9NXR5 420 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 MAP10Q9P2G4 905 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 COPS7AQ9UBW8 275 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 SNX8Q9Y5X2 465 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 KCNE3Q9Y6H6 103 aa11.3□□□□□ -0.6
TRA2B-212ENST00000480461 CACNA1DQ01668 2161 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 A0A1W2PP18 115 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 A1L4Q6 167 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 CCDC154A6NI56 674 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 MKRN2OSH3BPM6 223 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 NR5A2O00482 541 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 EMC8O43402 210 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 ITGA10O75578 1167 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 SLITRK5O94991 958 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 OR6B1O95007 311 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 ALPPP05187 535 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 DRD5P21918 477 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 GNLYP22749 145 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 PPICP45877 212 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 MAN2A2P49641 1150 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 NR0B1P51843 470 aaKnown RBP11.29□□□□□ -0.6
TRA2B-212ENST00000480461 CASP9P55211 416 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 IRX1P78414 480 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-212ENST00000480461 PSG6Q00889 435 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 TUBA3CQ13748 450 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 NNATQ16517 81 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 MEP1AQ16819 746 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 TUBA3EQ6PEY2 450 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 DLEU7Q6UYE1 221 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 C6orf120Q7Z4R8 191 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 MSRB3Q8IXL7 192 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 SLC5A8Q8N695 610 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 RBMXL3Q8N7X1 1067 aaKnown RBP11.29□□□□□ -0.6
TRA2B-212ENST00000480461 SLC16A11Q8NCK7 471 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 OR5L2Q8NGL0 311 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 OR4A15Q8NGL6 344 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 HAS2Q92819 552 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 TP53INP1Q96A56 240 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 OTUB1Q96FW1 271 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-212ENST00000480461 SLC35A4Q96G79 324 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 SIGLEC12Q96PQ1 595 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 GAL3ST4Q96RP7 486 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 RASL10BQ96S79 203 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 YIPF4Q9BSR8 244 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 PAIP1Q9H074 479 aaKnown RBP11.29□□□□□ -0.6
TRA2B-212ENST00000480461 DDX18Q9NVP1 670 aaKnown RBP11.29□□□□□ -0.6
TRA2B-212ENST00000480461 SLC25A37Q9NYZ2 338 aa11.29□□□□□ -0.6
TRA2B-212ENST00000480461 YARS2Q9Y2Z4 477 aaKnown RBP11.29□□□□□ -0.6
TRA2B-212ENST00000480461 NUP214P35658 2090 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-212ENST00000480461 LOC100653049A0A140TA62 436 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 GXYLT2A0PJZ3 443 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 CAPN14A8MX76 684 aa11.28□□□□□ -0.6
TRA2B-212ENST00000480461 PRAMEF2O60811 474 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms