RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.34■□□□□ 0.21
UPF3A-206ENST00000480362 TERTO14746 1132 aaKnown RBP16.34■□□□□ 0.21
UPF3A-206ENST00000480362 ENTPD5O75356 428 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 CREG1O75629 220 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 AGR2O95994 175 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 IGHEP01854 428 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 BCHEP06276 602 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 NR2F1P10589 423 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 MAP3K8P41279 467 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 POLE2P56282 527 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 SLC37A1P57057 533 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 RPS18P62269 152 aaKnown RBP16.34■□□□□ 0.21
UPF3A-206ENST00000480362 CAMK2BQ13554 666 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 DUSP5Q16690 384 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 PAPD4Q6PIY7 484 aaKnown RBP16.34■□□□□ 0.21
UPF3A-206ENST00000480362 RNF111Q6ZNA4 994 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 SLC30A8Q8IWU4 369 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 NFAM1Q8NET5 270 aaPredicted RBP16.34■□□□□ 0.21
UPF3A-206ENST00000480362 OR1N1Q8NGS0 311 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 HOXB13Q92826 284 aaPredicted RBP16.34■□□□□ 0.21
UPF3A-206ENST00000480362 CDS1Q92903 461 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 NKD1Q969G9 470 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 FAM162AQ96A26 154 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 FAM122AQ96E09 287 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 NSMCE2Q96MF7 247 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 LPAR4Q99677 370 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 WDR77Q9BQA1 342 aaPredicted RBP16.34■□□□□ 0.21
UPF3A-206ENST00000480362 LMF2Q9BU23 707 aaKnown RBP16.34■□□□□ 0.21
UPF3A-206ENST00000480362 GPR87Q9BY21 358 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 TRIM15Q9C019 465 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 PIGUQ9H490 435 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 EXD2Q9NVH0 621 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 P2RX2Q9UBL9 471 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 PRODH2Q9UF12 536 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 SPEGQ15772 3267 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 C21orf140B9A014 251 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 C5orf58C9J3I9 102 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 PCDH17O14917 1159 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 SLC28A2O43868 658 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 DXOO77932 396 aaKnown RBP16.33■□□□□ 0.2
UPF3A-206ENST00000480362 MMP11P24347 488 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 KDELR2P33947 212 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 GPR143P51810 404 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 MYBPC3Q14896 1274 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 RTP5Q14D33 572 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 ZNHIT3Q15649 155 aaPredicted RBP16.33■□□□□ 0.2
UPF3A-206ENST00000480362 MAPK11Q15759 364 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 SYPL1Q16563 259 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 ATAD3BQ5T9A4 648 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 REEP3Q6NUK4 255 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 SPATA24Q86W54 205 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 METTL25Q8N6Q8 603 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 AMER2Q8N7J2 671 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 ANKFN1Q8N957 763 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 GPR151Q8TDV0 419 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 TMEM19Q96HH6 336 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 VSTM2LQ96N03 204 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 STACQ99469 402 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 DUSP22Q9NRW4 184 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 GIN1Q9NXP7 522 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 COPS7AQ9UBW8 275 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 LIPT1Q9Y234 373 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 ANGPT4Q9Y264 503 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 DTX4Q9Y2E6 619 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 PCDHGB3Q9Y5G1 929 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 HS3ST3B1Q9Y662 390 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 AK5Q9Y6K8 562 aa16.33■□□□□ 0.2
UPF3A-206ENST00000480362 PTPRZ1P23471 2315 aaPredicted RBP16.33■□□□□ 0.2
UPF3A-206ENST00000480362 AQP12BA6NM10 295 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 A8MVJ9 347 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 GCM2O75603 506 aaPredicted RBP16.32■□□□□ 0.2
UPF3A-206ENST00000480362 SEC24DO94855 1032 aaPredicted RBP16.32■□□□□ 0.2
UPF3A-206ENST00000480362 SOX30O94993 753 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 NKX2-2O95096 273 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 F8A1P23610 371 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 AQP1P29972 269 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 GABRA3P34903 492 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 PSG6Q00889 435 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 FOXC1Q12948 553 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 SSPNQ14714 243 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 PCOLCEQ15113 449 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 GPAT3Q53EU6 434 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 INTS11Q5TA45 600 aaKnown RBP16.32■□□□□ 0.2
UPF3A-206ENST00000480362 C16orf62Q7Z3J2 963 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 GALNT10Q86SR1 603 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 DTX1Q86Y01 620 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 AQP12AQ8IXF9 295 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 B3GNT7Q8NFL0 401 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 SLC26A7Q8TE54 656 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 PIK3R3Q92569 461 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 ITPAQ9BY32 194 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 FAM117AQ9C073 453 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 PPIEQ9UNP9 301 aaKnown RBP16.32■□□□□ 0.2
UPF3A-206ENST00000480362 CFL2Q9Y281 166 aa16.32■□□□□ 0.2
UPF3A-206ENST00000480362 TCRBV5S2A0A599 114 aa16.31■□□□□ 0.2
UPF3A-206ENST00000480362 GXYLT2A0PJZ3 443 aa16.31■□□□□ 0.2
UPF3A-206ENST00000480362 TTC36A6NLP5 189 aa16.31■□□□□ 0.2
UPF3A-206ENST00000480362 SOCS6O14544 535 aa16.31■□□□□ 0.2
UPF3A-206ENST00000480362 PGM3O95394 542 aa16.31■□□□□ 0.2
UPF3A-206ENST00000480362 OTX2P32243 289 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms