RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 VSTM2LQ96N03 204 aa11.72□□□□□ -0.53
SIK3-209ENST00000480222 OR7D2Q96RA2 312 aa11.72□□□□□ -0.53
SIK3-209ENST00000480222 LPAR4Q99677 370 aa11.72□□□□□ -0.53
SIK3-209ENST00000480222 GPR87Q9BY21 358 aa11.72□□□□□ -0.53
SIK3-209ENST00000480222 PIGUQ9H490 435 aa11.72□□□□□ -0.53
SIK3-209ENST00000480222 PIF1Q9H611 641 aa11.72□□□□□ -0.53
SIK3-209ENST00000480222 AKIRIN1Q9H9L7 192 aaPredicted RBP11.72□□□□□ -0.53
SIK3-209ENST00000480222 THSD1Q9NS62 852 aa11.72□□□□□ -0.53
SIK3-209ENST00000480222 GMPR2Q9P2T1 348 aaKnown RBP11.72□□□□□ -0.53
SIK3-209ENST00000480222 PPIEQ9UNP9 301 aaKnown RBP11.72□□□□□ -0.53
SIK3-209ENST00000480222 HEMK1Q9Y5R4 338 aaPredicted RBP11.72□□□□□ -0.53
SIK3-209ENST00000480222 PDE9AO76083 593 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 DDAH2O95865 285 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 BCHEP06276 602 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 C8BP07358 591 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 UMODP07911 640 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 TFPTP0C1Z6 253 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 OR12D1P0DN82 309 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 HOXB6P17509 224 aaKnown RBP11.71□□□□□ -0.53
SIK3-209ENST00000480222 TCN2P20062 427 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 MMP11P24347 488 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 SSTR4P31391 388 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 MSX2P35548 267 aaPredicted RBP11.71□□□□□ -0.53
SIK3-209ENST00000480222 MAP3K8P41279 467 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 EMDP50402 254 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 CRISP3P54108 245 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 SLC37A1P57057 533 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 RPS15P62841 145 aaKnown RBP11.71□□□□□ -0.53
SIK3-209ENST00000480222 HPCAP84074 193 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 EEF1A2Q05639 463 aaKnown RBP11.71□□□□□ -0.53
SIK3-209ENST00000480222 DUSP8Q13202 625 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 DNASE1L3Q13609 305 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 CCNIQ14094 377 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 EXOSC7Q15024 291 aaKnown RBP11.71□□□□□ -0.53
SIK3-209ENST00000480222 GLYATQ6IB77 296 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 HEPHL1Q6MZM0 1159 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 REEP3Q6NUK4 255 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 RNF111Q6ZNA4 994 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 CPEB2Q7Z5Q1 589 aaKnown RBP11.71□□□□□ -0.53
SIK3-209ENST00000480222 PATL1Q86TB9 770 aaKnown RBP11.71□□□□□ -0.53
SIK3-209ENST00000480222 ZNF615Q8N8J6 731 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 B3GNT7Q8NFL0 401 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 OR5D16Q8NGK9 328 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 OR1N1Q8NGS0 311 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 BBS10Q8TAM1 723 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 ZNF721Q8TF20 911 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 MAL2Q969L2 176 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 FAM162AQ96A26 154 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 SENP5Q96HI0 755 aaPredicted RBP11.71□□□□□ -0.53
SIK3-209ENST00000480222 OR8D2Q9GZM6 311 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 OR10A5Q9H207 317 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 ANKRA2Q9H9E1 313 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 FOLH1BQ9HBA9 442 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 ASCL3Q9NQ33 180 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 OLAHQ9NV23 265 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 CALML5Q9NZT1 146 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 KCND3Q9UK17 655 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 TCFL5Q9UL49 500 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 USP22Q9UPT9 525 aa11.71□□□□□ -0.53
SIK3-209ENST00000480222 USP24Q9UPU5 2620 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 TCRBV3S1A0A5B6 114 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 A8MUI8 341 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 HRKO00198 91 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 FKBP6O75344 327 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 CREG1O75629 220 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 NKX2-2O95096 273 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 CLPSP04118 112 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 GPIP06744 558 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 NR2F1P10589 423 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 ACP2P11117 423 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 NCK1P16333 377 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 CLCN2P51788 898 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 CASP9P55211 416 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 PCBP3P57721 371 aaKnown RBP11.7□□□□□ -0.54
SIK3-209ENST00000480222 DCAF7P61962 342 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 RIPK1Q13546 671 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 MYBPC3Q14896 1274 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 RTP5Q14D33 572 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 FAAH2Q6GMR7 532 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 ZFP1Q6P2D0 407 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 PAPD4Q6PIY7 484 aaKnown RBP11.7□□□□□ -0.54
SIK3-209ENST00000480222 CCDC80Q76M96 950 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 C16orf62Q7Z3J2 963 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 SPATA24Q86W54 205 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 COX18Q8N8Q8 333 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 SLC16A11Q8NCK7 471 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 C17orf47Q8NEP4 570 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 C16orf52Q8NHV5 167 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 NFKBIDQ8NI38 313 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 FBXO30Q8TB52 745 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 SLC38A5Q8WUX1 472 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 SLC9A6Q92581 669 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 RAB8BQ92930 207 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 VMP1Q96GC9 406 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 C16orf58Q96GQ5 468 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 TMEM19Q96HH6 336 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 RSRC1Q96IZ7 334 aaKnown RBP11.7□□□□□ -0.54
SIK3-209ENST00000480222 BTBD9Q96Q07 612 aa11.7□□□□□ -0.54
SIK3-209ENST00000480222 TRNT1Q96Q11 434 aaKnown RBP11.7□□□□□ -0.54
SIK3-209ENST00000480222 BTBD2Q9BX70 525 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms