RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 CAVIN3Q969G5 261 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 KLHL4Q9C0H6 718 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 EHD3Q9NZN3 535 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 HEY2Q9UBP5 337 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 DKKL1Q9UK85 242 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 FBXL2Q9UKC9 423 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 PPP2R2CQ9Y2T4 447 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 TSC22D4Q9Y3Q8 395 aa15.51■□□□□ 0.07
VIM-204ENST00000478746 A0A087X1B8 175 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.5■□□□□ 0.07
VIM-204ENST00000478746 ACOX3O15254 700 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 EMC8O43402 210 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 KLF4O43474 513 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 TLX2O43763 284 aaPredicted RBP15.5■□□□□ 0.07
VIM-204ENST00000478746 PIAS1O75925 651 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 CGAP01215 116 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 CPMP14384 443 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 PORP16435 677 aaPredicted RBP15.5■□□□□ 0.07
VIM-204ENST00000478746 STMN1P16949 149 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 TCEA1P23193 301 aaKnown RBP15.5■□□□□ 0.07
VIM-204ENST00000478746 HMGCS1Q01581 520 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 CUL3Q13618 768 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 C10orf62Q5T681 223 aaPredicted RBP15.5■□□□□ 0.07
VIM-204ENST00000478746 LIPJQ5W064 366 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 ZNF704Q6ZNC4 412 aaPredicted RBP15.5■□□□□ 0.07
VIM-204ENST00000478746 TEX9Q8N6V9 391 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 FBXO36Q8NEA4 188 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 ACTRT1Q8TDG2 376 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 REPS1Q96D71 796 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 TMCO6Q96DC7 493 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 UBXN10Q96LJ8 280 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 ITPAQ9BY32 194 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 REG4Q9BYZ8 158 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 ALG9Q9H6U8 611 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 YAE1D1Q9NRH1 226 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 NUDT4Q9NZJ9 180 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 ANGPTL3Q9Y5C1 460 aa15.5■□□□□ 0.07
VIM-204ENST00000478746 FRG2CA6NGY1 282 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 SUPT3HB4E1H0 165 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 ZIC3O60481 467 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 SUPT3HO75486 399 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 PLAUP00749 431 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 CD8BP10966 210 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 PEPDP12955 493 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 MAP4K2Q12851 820 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 EXOSC7Q15024 291 aaKnown RBP15.49■□□□□ 0.07
VIM-204ENST00000478746 OR5M10Q6IEU7 315 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 FAM111BQ6SJ93 734 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 NUDT13Q86X67 352 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 UBQLNLQ8IYU4 475 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 ZNF611Q8N823 705 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 ADCY4Q8NFM4 1077 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 FIG4Q92562 907 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 BRINP2Q9C0B6 783 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 DDX47Q9H0S4 455 aaKnown RBP15.49■□□□□ 0.07
VIM-204ENST00000478746 SMYD2Q9NRG4 433 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 PSD3Q9NYI0 1048 aa15.49■□□□□ 0.07
VIM-204ENST00000478746 CUBNO60494 3623 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 H0YIV9 168 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 UBXN8O00124 270 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 HS3ST1O14792 307 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 REM1O75628 298 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 F12P00748 615 aaPredicted RBP15.48■□□□□ 0.07
VIM-204ENST00000478746 THBDP07204 575 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 DRD5P21918 477 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 DPP4P27487 766 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 EEFSECP57772 596 aaKnown RBP15.48■□□□□ 0.07
VIM-204ENST00000478746 PDIA2Q13087 525 aaKnown RBP15.48■□□□□ 0.07
VIM-204ENST00000478746 FGFBP1Q14512 234 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 CPSF6Q16630 551 aaKnown RBP eCLIP15.48■□□□□ 0.07
VIM-204ENST00000478746 EXOC3L2Q2M3D2 409 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 PRICKLE4Q2TBC4 344 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 ISCA2Q86U28 154 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 LRRC8AQ8IWT6 810 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 UBTD2Q8WUN7 234 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 TRMT61AQ96FX7 289 aaKnown RBP15.48■□□□□ 0.07
VIM-204ENST00000478746 COL21A1Q96P44 957 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 OSBPL9Q96SU4 736 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 TXNDC16Q9P2K2 825 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 PROCRQ9UNN8 238 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 LAMP3Q9UQV4 416 aa15.48■□□□□ 0.07
VIM-204ENST00000478746 OR6C70A6NIJ9 312 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 EFCAB8A8MWE9 144 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 CD5LO43866 347 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 ABCB7O75027 752 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 TNFRSF21O75509 655 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 PPP3CBP16298 524 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 IDUAP35475 653 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 PPICP45877 212 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 NEK2P51955 445 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 RPS4XP62701 263 aaKnown RBP15.47■□□□□ 0.07
VIM-204ENST00000478746 MGAT2Q10469 447 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 FASTKD3Q14CZ7 662 aaKnown RBP15.47■□□□□ 0.07
VIM-204ENST00000478746 ETFDHQ16134 617 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 CHRFAM7AQ494W8 412 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 MILR1Q7Z6M3 343 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 TMBIM1Q969X1 311 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 PLPPR2Q96GM1 343 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 GPR22Q99680 433 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 PINK1Q9BXM7 581 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms