RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 STX1BP61266 288 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 HBA1P69905 142 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 PSPHP78330 225 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 ZNF791Q3KP31 576 aaPredicted RBP24.71■■□□□ 1.55
CCM2-211ENST00000478582 METTL21CQ5VZV1 264 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 CLEC18BQ6UXF7 455 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 CYP4Z2PQ8N1L4 340 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 CLEC18CQ8NCF0 446 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 FAM120BQ96EK7 910 aaKnown RBP24.71■■□□□ 1.55
CCM2-211ENST00000478582 CHMP6Q96FZ7 201 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 SCMH1Q96GD3 660 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 MAGED4Q96JG8 741 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 SGCZQ96LD1 299 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 RILPQ96NA2 401 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 TMEM120AQ9BXJ8 343 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 CXorf36Q9H7Y0 433 aa24.71■■□□□ 1.55
CCM2-211ENST00000478582 SETXQ7Z333 2677 aaKnown RBP24.71■■□□□ 1.55
CCM2-211ENST00000478582 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 TTC36A6NLP5 189 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 FBXO45P0C2W1 286 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 CT45A8P0DMV1 189 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 CT45A9P0DMV2 189 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 CD46P15529 392 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 NAGAP17050 411 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 GNLYP22749 145 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 PRR5P85299 388 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 LRRC74AQ0VAA2 488 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 UBAP2LQ14157 1087 aaKnown RBP24.7■■□□□ 1.54
CCM2-211ENST00000478582 CT45A2Q5DJT8 189 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 ZNF766Q5HY98 468 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 SLC25A25Q6KCM7 469 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 PAOXQ6QHF9 649 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 IL20RBQ6UXL0 311 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 CLECL1Q8IZS7 167 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 NUP43Q8NFH3 380 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 HOXB13Q92826 284 aaPredicted RBP24.7■■□□□ 1.54
CCM2-211ENST00000478582 SPACA9Q96E40 222 aaPredicted RBP24.7■■□□□ 1.54
CCM2-211ENST00000478582 GIMAP5Q96F15 307 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 ASF1BQ9NVP2 202 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 KLHL14Q9P2G3 628 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 BTNL2Q9UIR0 455 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 TRIM33Q9UPN9 1127 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 ERVK-11Q9UQG0 969 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 NPFFR2Q9Y5X5 522 aa24.7■■□□□ 1.54
CCM2-211ENST00000478582 COPG1Q9Y678 874 aaKnown RBP24.7■■□□□ 1.54
CCM2-211ENST00000478582 CFLARO15519 480 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 NME6O75414 186 aaPredicted RBP24.69■■□□□ 1.54
CCM2-211ENST00000478582 SLC25A12O75746 678 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 SP1P08047 785 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 UQCRFS1P47985 274 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 DGKQP52824 942 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 PSG6Q00889 435 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 RTL4Q6ZR62 310 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 GOLM1Q8NBJ4 401 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 SFXN5Q8TD22 340 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 TMEM125Q96AQ2 219 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 MOAP1Q96BY2 351 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 C5orf34Q96MH7 638 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 CCDC115Q96NT0 180 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 MS4A4EQ96PG1 132 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 LMF2Q9BU23 707 aaKnown RBP24.69■■□□□ 1.54
CCM2-211ENST00000478582 PCDHGB4Q9UN71 923 aa24.69■■□□□ 1.54
CCM2-211ENST00000478582 FAM234BA2RU67 622 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 CAPN14A8MX76 684 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 C9JVG2 144 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 MAP3K8P41279 467 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 CCT3P49368 545 aaKnown RBP24.68■■□□□ 1.54
CCM2-211ENST00000478582 POLR2JP52435 117 aaKnown RBP24.68■■□□□ 1.54
CCM2-211ENST00000478582 ARFIP2P53365 341 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 ZNF155Q12901 538 aaPredicted RBP24.68■■□□□ 1.54
CCM2-211ENST00000478582 SQLEQ14534 574 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 INAQ16352 499 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 NTRK2Q16620 822 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 ZCCHC12Q6PEW1 402 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 MSANTD1Q6ZTZ1 278 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 TMEM178AQ8NBL3 297 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 OR9I1Q8NGQ6 314 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 GOT1L1Q8NHS2 421 aaPredicted RBP24.68■■□□□ 1.54
CCM2-211ENST00000478582 OR52E6Q96RD3 313 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 ZNF385DQ9H6B1 395 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 TIMMDC1Q9NPL8 285 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 ZCCHC3Q9NUD5 404 aaKnown RBP24.68■■□□□ 1.54
CCM2-211ENST00000478582 SNX8Q9Y5X2 465 aa24.68■■□□□ 1.54
CCM2-211ENST00000478582 RP1L1Q8IWN7 2480 aaPredicted RBP24.67■■□□□ 1.54
CCM2-211ENST00000478582 NME2P1O60361 137 aa24.67■■□□□ 1.54
CCM2-211ENST00000478582 NME2P22392 152 aa24.67■■□□□ 1.54
CCM2-211ENST00000478582 ABCD3P28288 659 aa24.67■■□□□ 1.54
CCM2-211ENST00000478582 TMED10P49755 219 aaKnown RBP24.67■■□□□ 1.54
CCM2-211ENST00000478582 GYS2P54840 703 aa24.67■■□□□ 1.54
CCM2-211ENST00000478582 CORO7P57737 925 aa24.67■■□□□ 1.54
CCM2-211ENST00000478582 SRSF1Q07955 248 aaKnown RBP eCLIP24.67■■□□□ 1.54
CCM2-211ENST00000478582 EXOSC6Q5RKV6 272 aaKnown RBP24.67■■□□□ 1.54
CCM2-211ENST00000478582 NPSR1Q6W5P4 371 aa24.67■■□□□ 1.54
CCM2-211ENST00000478582 MDGA2Q7Z553 956 aa24.67■■□□□ 1.54
CCM2-211ENST00000478582 FAM26EQ8N5C1 309 aa24.67■■□□□ 1.54
CCM2-211ENST00000478582 CDRT4Q8N9R6 151 aa24.67■■□□□ 1.54
CCM2-211ENST00000478582 OR56A1Q8NGH5 318 aa24.67■■□□□ 1.54
CCM2-211ENST00000478582 BARD1Q99728 777 aaKnown RBP24.67■■□□□ 1.54
CCM2-211ENST00000478582 RABEP2Q9H5N1 569 aa24.67■■□□□ 1.54
CCM2-211ENST00000478582 SH2D2AQ9NP31 389 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms