RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ACVR2AP27037 513 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 GRK6P43250 576 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 RGS6P49758 472 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 PPP5CP53041 499 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF33BQ06732 778 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 ENPP2Q13822 863 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 E2F2Q14209 437 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 PTOV1Q86YD1 416 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 CSNK1A1LQ8N752 337 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 DUS3LQ96G46 650 aaKnown RBP10.41□□□□□ -0.74
COL27A1-204ENST00000477421 PEX11GQ96HA9 241 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 SAMD8Q96LT4 415 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 CENPOQ9BU64 300 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 DPH1Q9BZG8 443 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 TMEM168Q9H0V1 697 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 SP140LQ9H930 580 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 FAIMQ9NVQ4 179 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 SPATA6Q9NWH7 488 aaPredicted RBP10.41□□□□□ -0.74
COL27A1-204ENST00000477421 PLXNB2O15031 1838 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 A0A075B6Q4 140 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 PLD2O14939 933 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 DNAJB5O75953 348 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 HLA-DPB1P04440 258 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 CAV3P56539 151 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 DCDC1P59894 354 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 EXOSC7Q15024 291 aaKnown RBP10.41□□□□□ -0.74
COL27A1-204ENST00000477421 PIP5KL1Q5T9C9 394 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 PLAG1Q6DJT9 500 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF367Q7RTV3 350 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 CPOQ8IVL8 374 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 MUL1Q969V5 352 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 SAMD11Q96NU1 681 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 TM9SF2Q99805 663 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 DPYSL5Q9BPU6 564 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 KCNN2Q9H2S1 579 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 RYDENQ9NUL5 291 aaKnown RBP10.41□□□□□ -0.74
COL27A1-204ENST00000477421 KCMF1Q9P0J7 381 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 ZFC3H1O60293 1989 aaKnown RBP10.41□□□□□ -0.74
COL27A1-204ENST00000477421 ELOA3DA6NLF2 546 aaPredicted RBP10.41□□□□□ -0.74
COL27A1-204ENST00000477421 GYPBP06028 91 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 CDK1P06493 297 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 ITGAMP11215 1152 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 NDUFAF6Q330K2 333 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 ELOA3BQ3SY89 546 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 TMEM35AQ53FP2 167 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 C6orf183Q5T699 404 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF517Q6ZMY9 492 aaPredicted RBP10.41□□□□□ -0.74
COL27A1-204ENST00000477421 DGLUCYQ7Z3D6 616 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 ANKRD13BQ86YJ7 626 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 DNAJC22Q8N4W6 341 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 ELOA3Q8NG57 546 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 OR2T33Q8NG76 320 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 OR2L5Q8NG80 312 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 C5orf34Q96MH7 638 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 DGAT2Q96PD7 388 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 GSDMCQ9BYG8 508 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 TMEM138Q9NPI0 162 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 MKKSQ9NPJ1 570 aaPredicted RBP10.41□□□□□ -0.74
COL27A1-204ENST00000477421 TMEM184CQ9NVA4 438 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 MKL2Q9ULH7 1088 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 CENPFP49454 3210 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 FOXE1O00358 373 aaPredicted RBP10.41□□□□□ -0.74
COL27A1-204ENST00000477421 TMPRSS11DO60235 418 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 RCVRNP35243 200 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 AHRP35869 848 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 KDM4DQ6B0I6 523 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 KLHDC8BQ8IXV7 354 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 Q8N9G6 341 aaPredicted RBP10.41□□□□□ -0.74
COL27A1-204ENST00000477421 OR8K3Q8NH51 312 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 WDR20Q8TBZ3 569 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 OSTF1Q92882 214 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 CDS1Q92903 461 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 TM4SF18Q96CE8 201 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 TAAR2Q9P1P5 351 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 CORINQ9Y5Q5 1042 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 MAU2Q9Y6X3 613 aa10.41□□□□□ -0.74
COL27A1-204ENST00000477421 A0A1W2PRG6 482 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 POM121BA6NF01 834 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 XKRYO14609 159 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 SLC16A6O15403 523 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 PRAMEF4O60810 478 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 KHDRBS3O75525 346 aaKnown RBP10.4□□□□□ -0.74
COL27A1-204ENST00000477421 SEC14L2O76054 403 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 SLITRK5O94991 958 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 RCBTB2O95199 551 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 AIFM1O95831 613 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 GIPRP48546 466 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 BLKP51451 505 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 GP2P55259 537 aaKnown RBP10.4□□□□□ -0.74
COL27A1-204ENST00000477421 RELAQ04206 551 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 CRYZQ08257 329 aaKnown RBP10.4□□□□□ -0.74
COL27A1-204ENST00000477421 MESP2Q0VG99 397 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 ERV3-1Q14264 604 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 TMEM240Q5SV17 173 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 PRAMEF9Q5VWM5 478 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 LRRC17Q8N6Y2 441 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 THAP3Q8WTV1 239 aaPredicted RBP10.4□□□□□ -0.74
COL27A1-204ENST00000477421 COQ8BQ96D53 544 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 KLHDC7BQ96G42 594 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF354BQ96LW1 612 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms