RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	MARC1	Q5VT66	337 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	OR6B2	Q6IFH4	312 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	ATRAID	Q6UW56	229 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	BAIAP2L2	Q6UXY1	529 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	TAF8	Q7Z7C8	310 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	FTHL17	Q9BXU8	183 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	TRIM9	Q9C026	710 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	XPO4	Q9C0E2	1151 aa	Known RBP	3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	ABCG8	Q9H221	673 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	TSPY26P	Q9H489	355 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	FAM124B	Q9H5Z6	455 aa	Predicted RBP	3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	ALG9	Q9H6U8	611 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	PRR34	Q9NV39	138 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	ANO10	Q9NW15	660 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	HOOK1	Q9UJC3	728 aa	Known RBP	3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	VSIG4	Q9Y279	399 aa		3.2	□□□□□ -1.9
RBM39-231	ENST00000477334	ZMYM6	O95789	1325 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	CFAP73	A6NFT4	308 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	MFSD2B	A6NFX1	497 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	ARHGAP42	A6NI28	874 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	EFCAB7	A8K855	629 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	ADAM12	O43184	909 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	SDC3	O75056	442 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	IGKV3-15	P01624	115 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	CXCL10	P02778	98 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	PVR	P15151	417 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	ACP1	P24666	158 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	PRDX6	P30041	224 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	AKT2	P31751	481 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	SFN	P31947	248 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	HSPA1L	P34931	641 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	MAGEA4	P43358	317 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	NOV	P48745	357 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	NOP14	P78316	857 aa	Known RBP	3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	PAX2	Q02962	417 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	BNIP1	Q12981	228 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	ZNF699	Q32M78	642 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	CCDC40	Q4G0X9	1142 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	RAB12	Q6IQ22	244 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	TATDN1	Q6P1N9	297 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	MIER3	Q7Z3K6	550 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	TSEN54	Q7Z6J9	526 aa	Known RBP	3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	GPBP1	Q86WP2	473 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	ZNF584	Q8IVC4	421 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	ZBED8	Q8IZ13	594 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	TEX9	Q8N6V9	391 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	ANKRD20A12P	Q8NF67	263 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	ZNF397	Q8NF99	534 aa	Predicted RBP	3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	MRAP	Q8TCY5	172 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	VN1R17P	Q8TDU5	208 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	GTSF1	Q8WW33	167 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	SLC13A3	Q8WWT9	602 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	TAF4B	Q92750	862 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	PPP1R16A	Q96I34	528 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	STARD5	Q9NSY2	213 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	IMPAD1	Q9NX62	359 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	NUDC	Q9Y266	331 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	RPH3A	Q9Y2J0	694 aa	Predicted RBP	3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	FKBP7	Q9Y680	259 aa		3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	SPAG9	O60271	1321 aa	Known RBP	3.19	□□□□□ -1.9
RBM39-231	ENST00000477334	BUB1	O43683	1085 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	TYROBP	O43914	113 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	STK17B	O94768	372 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	ALPP	P05187	535 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	CCDC192	P0DO97	292 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	ALPPL2	P10696	532 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	GAP43	P17677	238 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	IDS	P22304	550 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	MAPK3	P27361	379 aa	Predicted RBP	3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	PTPN4	P29074	926 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	KIF5B	P33176	963 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	RFC2	P35250	354 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	MAGEA9	P43362	315 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	POU3F4	P49335	361 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	MYBPC1	Q00872	1141 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	PDK1	Q15118	436 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	PRR5L	Q6MZQ0	368 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	CATSPER4	Q7RTX7	472 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	RANBP3L	Q86VV4	465 aa	Predicted RBP	3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	CENPS	Q8N2Z9	138 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	RFESD	Q8TAC1	157 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	DLX4	Q92988	240 aa	Predicted RBP	3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	CCDC51	Q96ER9	411 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	SERAC1	Q96JX3	654 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	NSMCE2	Q96MF7	247 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	NDUFAF3	Q9BU61	184 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	CLIP2	Q9UDT6	1046 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	CCPG1	Q9ULG6	757 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	TMCC3	Q9ULS5	477 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	RNF115	Q9Y4L5	304 aa		3.18	□□□□□ -1.9
RBM39-231	ENST00000477334	ZNF318	Q5VUA4	2279 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	KRT87P	A6NCN2	255 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	LRIT2	A6NDA9	550 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	C11orf98	E9PRG8	122 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	CPLX1	O14810	134 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	TSC22D2	O75157	780 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	IGSF6	O95976	241 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	ALPI	P09923	528 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	SLC35E2	P0CK97	266 aa		3.17	□□□□□ -1.9

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