RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.27□□□□□ -2.05
XRN1-211ENST00000477237 SERTAD4-AS1Q5TG53 156 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 MLIPQ5VWP3 458 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 NKAIN2Q5VXU1 208 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 RNLSQ5VYX0 342 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 KRT79Q5XKE5 535 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ATG16L1Q676U5 607 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 KCTD16Q68DU8 428 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 SLC25A25Q6KCM7 469 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 TTC27Q6P3X3 843 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 RFWD3Q6PCD5 774 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 MOXD1Q6UVY6 613 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 NPSR1Q6W5P4 371 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 LINGO2Q7L985 606 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 LRRC70Q7Z2Q7 622 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 GPR141Q7Z602 305 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 HAPLN4Q86UW8 402 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 CDR2LQ86X02 465 aaPredicted RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 ZNF573Q86YE8 665 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 BBS7Q8IWZ6 715 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 KATNAL2Q8IYT4 538 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ADGRF2Q8IZF7 708 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 SELENOHQ8IZQ5 122 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 THEM5Q8N1Q8 247 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 COMMD1Q8N668 190 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ALLCQ8N6M5 410 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 TTC29Q8NA56 475 aaPredicted RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 TMEM104Q8NE00 496 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 OR4C15Q8NGM1 316 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 FNDC8Q8TC99 324 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ST7LQ8TDW4 575 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 SLC38A5Q8WUX1 472 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 PRPF31Q8WWY3 499 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 PYDC1Q8WXC3 89 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 RLN3Q8WXF3 142 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ESR2Q92731 530 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 BCL2L2Q92843 193 aaPredicted RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 MYDGFQ969H8 173 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 MRGPRFQ96AM1 343 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 KLHL29Q96CT2 875 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 PERPQ96FX8 193 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 PLEKHA8Q96JA3 519 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 C9orf72Q96LT7 481 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 KLHL5Q96PQ7 755 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 CSPG4P5Q96PW8 444 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 CYP2S1Q96SQ9 504 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 CD180Q99467 661 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 SEC22CQ9BRL7 303 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 C11orf70Q9BRQ4 267 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 PELOQ9BRX2 385 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 UBAC1Q9BSL1 405 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 FUZQ9BT04 418 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 CNPY3Q9BT09 278 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 NUP58Q9BVL2 599 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 MRPL13Q9BYD1 178 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 FTOQ9C0B1 505 aaKnown RBP eCLIP2.27□□□□□ -2.05
XRN1-211ENST00000477237 ZNF350Q9GZX5 532 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 MMP27Q9H306 513 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 FBXO44Q9H4M3 255 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 POLR1BQ9H9Y6 1135 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ASCL3Q9NQ33 180 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ZNF302Q9NR11 478 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 PRMT8Q9NR22 394 aaPredicted RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 SLC6A13Q9NSD5 602 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 C20orf96Q9NUD7 363 aaPredicted RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 GIMAP4Q9NUV9 329 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 EXD2Q9NVH0 621 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 THUMPD1Q9NXG2 353 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 CLEC5AQ9NY25 188 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 RBAKQ9NYW8 714 aaPredicted RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 CHRNA9Q9UGM1 479 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 NAGKQ9UJ70 344 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 NOCTQ9UK39 431 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 MAN1B1Q9UKM7 699 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 CDH7Q9ULB5 785 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 RAB23Q9ULC3 237 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 NIP7Q9Y221 180 aaKnown RBP eCLIP2.27□□□□□ -2.05
XRN1-211ENST00000477237 EXOGQ9Y2C4 368 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 MRPS7Q9Y2R9 242 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 GDAQ9Y2T3 454 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 TDRKHQ9Y2W6 561 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 DHRS7Q9Y394 339 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 FAM96BQ9Y3D0 163 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 STRAPQ9Y3F4 350 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 RIMS1Q86UR5 1692 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 CAMSAP2Q08AD1 1489 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 PRAG1Q86YV5 1406 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 NUP155O75694 1391 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 CLUHO75153 1309 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 MAP3K15Q6ZN16 1313 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 A0A087WZY1 265 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 ELOVL7A1L3X0 281 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 HELTA6NFD8 242 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 NPIPB15A6NHN6 443 aaPredicted RBP2.26□□□□□ -2.05
XRN1-211ENST00000477237 OR52A4PA6NMU1 304 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 SUPT3HB4E1H0 165 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 E5RI56 91 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 E7ESA3 106 aa2.26□□□□□ -2.05
XRN1-211ENST00000477237 F8W036 122 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms