RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 HNRNPFP52597 415 aaKnown RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 IST1P53990 364 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 IGLV3-21P80748 117 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 FAM83EQ2M2I3 478 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ZNF791Q3KP31 576 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 PAGE2Q7Z2X7 111 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 MILR1Q7Z6M3 343 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 MYLK4Q86YV6 388 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ZZZ3Q8IYH5 903 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 EXT2Q93063 718 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ZFP3Q96NJ6 502 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 GAL3ST4Q96RP7 486 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 GPR22Q99680 433 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 NAPGQ99747 312 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 TMEM79Q9BSE2 394 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 TRIM31Q9BZY9 425 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 CXXC4Q9H2H0 198 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ACTR8Q9H981 624 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 Q9UFV3 132 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 IKZF3Q9UKT9 509 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 L3MBTL1Q9Y468 752 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 PSAT1Q9Y617 370 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 C2CD3Q4AC94 2353 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 PDZD2O15018 2839 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ZNF407Q9C0G0 2248 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 A0A087X1B8 175 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 PINLYPA6NC86 204 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 TUBAL3A6NHL2 446 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 NUDT19A8MXV4 375 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 CASKO14936 926 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 KERAO60938 352 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ETHE1O95571 254 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 C1QAP02745 245 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 DBHP09172 617 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 SLC35E2BP0CK96 405 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 SLC35E2P0CK97 266 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 CCL3P10147 92 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 NR2F6P10588 404 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 GFAPP14136 432 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ARL1P40616 181 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 PSPHP78330 225 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 FOXO1Q12778 655 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 CUL3Q13618 768 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 DDX39BQ13838 428 aaKnown RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 E2F2Q14209 437 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ZNF267Q14586 743 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 SLMAPQ14BN4 828 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 RPS6KA2Q15349 733 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 TOMM20Q15388 145 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 NTRK2Q16620 822 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 KCTD19Q17RG1 926 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 OR52E8Q6IFG1 317 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 C16orf47Q6ZP98 133 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 C3orf62Q6ZUJ4 267 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 NUDT13Q86X67 352 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ULK2Q8IYT8 1036 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 LRRC25Q8N386 305 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 OR7G3Q8NG95 312 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 OR7G1Q8NGA0 311 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 UBTD2Q8WUN7 234 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 UCN3Q969E3 161 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ATP6V1E2Q96A05 226 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ANKRD9Q96BM1 317 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 SERPINI1Q99574 410 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 AICDAQ9GZX7 198 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 RAB17Q9H0T7 212 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ZNF703Q9H7S9 590 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 SAYSD1Q9NPB0 183 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 RASSF1Q9NS23 344 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 NMRK1Q9NWW6 199 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 PSME2Q9UL46 239 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 NFU1Q9UMS0 254 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 MTO1Q9Y2Z2 717 aaKnown RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 ACOT9Q9Y305 439 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 UTP11Q9Y3A2 253 aaKnown RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 CLDN16Q9Y5I7 305 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 FAM215AQ9Y5M1 114 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 GOLGA6L10A6NI86 522 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 A6NNC1 897 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 PHGDHO43175 533 aaKnown RBP6.65□□□□□ -1.34
BRCA1-214ENST00000477152 FGF17O60258 216 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 ERN1O75460 977 aaKnown RBP6.65□□□□□ -1.34
BRCA1-214ENST00000477152 IL18BPO95998 194 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 ACTL6AO96019 429 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 RAF1P04049 648 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 NAGAP17050 411 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 BMP5P22003 454 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 DEKP35659 375 aaKnown RBP6.65□□□□□ -1.34
BRCA1-214ENST00000477152 PIGAP37287 484 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 DIO3P55073 304 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 GNG11P61952 73 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 HERVK_113P63132 956 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 ERVK-8P63133 956 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 SORDQ00796 357 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 KEAP1Q14145 624 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 DAZAP2Q15038 168 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-214ENST00000477152 C18orf21Q32NC0 220 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-214ENST00000477152 FBXL19-AS1Q494R0 122 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 ENPP6Q6UWR7 440 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 TEX9Q8N6V9 391 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms