RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 EQTNQ9NQ60 294 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 CALML5Q9NZT1 146 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 OSGIN1Q9UJX0 560 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 SPTY2D1-AS1A0A0U1RR47 76 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 ANKRD33BA6NCL7 494 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 EFCAB10A6NFE3 127 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 H0YGG7 62 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 B3GALT2O43825 422 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 PRKAR1BP31321 381 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 OPRL1P41146 370 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 XKP51811 444 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 PDX1P52945 283 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 ARF3P61204 181 aaPredicted RBP10.77□□□□□ -0.69
NUP188-205ENST00000477069 LSM3P62310 102 aaKnown RBP10.77□□□□□ -0.69
NUP188-205ENST00000477069 TARDBPQ13148 414 aaKnown RBP eCLIP10.77□□□□□ -0.694e-11■■■■■ 41.3
NUP188-205ENST00000477069 FZD2Q14332 565 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 TIGD6Q17RP2 521 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 INAVAQ3KP66 663 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 ENTPD8Q5MY95 495 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 C6orf132Q5T0Z8 1188 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 FRRS1Q6ZNA5 592 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 ABHD13Q7L211 337 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 SLCO6A1Q86UG4 719 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 VRK2Q86Y07 508 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 TRIM48Q8IWZ4 208 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 SAMD14Q8IZD0 417 aaPredicted RBP10.77□□□□□ -0.69
NUP188-205ENST00000477069 TDHQ8IZJ6 230 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 FRMD1Q8N878 549 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 OR4K14Q8NGD5 310 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 SLC37A2Q8TED4 501 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 LGALS12Q96DT0 336 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 MSANTD3Q96H12 275 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 PLEKHA8Q96JA3 519 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 SLC6A18Q96N87 628 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 KLHL25Q9H0H3 589 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 POLR2J3Q9H1A7 115 aaKnown RBP10.77□□□□□ -0.69
NUP188-205ENST00000477069 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.77□□□□□ -0.69
NUP188-205ENST00000477069 URADA6NGE7 173 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 ENTPD6O75354 484 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 ALPPP05187 535 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 PVRP15151 417 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 POU1F1P28069 291 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 GRK5P34947 590 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 TGFBR1P36897 503 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 SIM1P81133 766 aaPredicted RBP10.77□□□□□ -0.69
NUP188-205ENST00000477069 EFNB1P98172 346 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 COX10Q12887 443 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 COL9A2Q14055 689 aaPredicted RBP10.77□□□□□ -0.69
NUP188-205ENST00000477069 SYT16Q17RD7 645 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 ZNF311Q5JNZ3 666 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 PRSS41Q7RTY9 318 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 STX19Q8N4C7 294 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 SLC16A11Q8NCK7 471 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 OR4K5Q8NGD3 323 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 C9orf43Q8TAL5 461 aaPredicted RBP10.77□□□□□ -0.69
NUP188-205ENST00000477069 DIO2Q92813 273 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 TOE1Q96GM8 510 aaKnown RBP10.77□□□□□ -0.69
NUP188-205ENST00000477069 CRELD1Q96HD1 420 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 GSDMCQ9BYG8 508 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 SLIRPQ9GZT3 109 aaKnown RBP10.77□□□□□ -0.69
NUP188-205ENST00000477069 DNAAF2Q9NVR5 837 aaKnown RBP10.77□□□□□ -0.69
NUP188-205ENST00000477069 CLN6Q9NWW5 311 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 TAS2R16Q9NYV7 291 aa10.77□□□□□ -0.69
NUP188-205ENST00000477069 KIR2DS5A0A0G2JLQ3 304 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 A0A0G2JNG1 304 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 A0A0J9YY10 115 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 H3BQ06 376 aaPredicted RBP10.76□□□□□ -0.69
NUP188-205ENST00000477069 KIR2DS3K7RE56 304 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 FCMRO60667 390 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 CPMP14384 443 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 ALOX12P18054 663 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 IDUAP35475 653 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 UGT2B10P36537 528 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 C21orf59P57076 290 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 OLR1P78380 273 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 OCA2Q04671 838 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 KIR2DS5Q14953 304 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 NDUFA9Q16795 377 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 C19orf48Q6RUI8 117 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 Q6ZNX1 250 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 ZNF367Q7RTV3 350 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 IQCHQ86VS3 1027 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 ZNF687Q8N1G0 1237 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 ARHGEF39Q8N4T4 335 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 NR4A3Q92570 626 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 ITFG2Q969R8 447 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 DACH2Q96NX9 599 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 PTGFRNQ9P2B2 879 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 SLCO1B1Q9Y6L6 691 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 CYR61O00622 381 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 ZSCAN9O15535 394 aaPredicted RBP10.76□□□□□ -0.69
NUP188-205ENST00000477069 BMP8BP34820 402 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 PPP1CAP62136 330 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 CDK5Q00535 292 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 FAM214AQ32MH5 1076 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 MANEAQ5SRI9 462 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 SLC25A30Q5SVS4 291 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 PLAG1Q6DJT9 500 aa10.76□□□□□ -0.69
NUP188-205ENST00000477069 TYW3Q6IPR3 259 aaKnown RBP10.76□□□□□ -0.69
NUP188-205ENST00000477069 OR4N5Q8IXE1 308 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms