RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 DYDC1Q8WWB3 177 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 CKAP2Q8WWK9 683 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 COQ8BQ96D53 544 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 ERP27Q96DN0 273 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 ZBED6CLQ96FA7 236 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-208ENST00000476739 MARK4Q96L34 752 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 SGCZQ96LD1 299 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 VSTM2LQ96N03 204 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 C7orf26Q96N11 449 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 BTBD9Q96Q07 612 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 OR52B2Q96RD2 323 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 AGPAT4Q9NRZ5 378 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 PRODH2Q9UF12 536 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 ADAM21Q9UKJ8 722 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 CNOT11Q9UKZ1 510 aaKnown RBP8.92□□□□□ -0.98
HDAC3-208ENST00000476739 CFL2Q9Y281 166 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 KLF13Q9Y2Y9 288 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-208ENST00000476739 USH1CQ9Y6N9 552 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 ESPL1Q14674 2120 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 NCKAP5O14513 1909 aa8.92□□□□□ -0.98
HDAC3-208ENST00000476739 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 A0A1W2PRB8 838 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 ANKUB1A6NFN9 424 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 FRG2CA6NGY1 282 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 TRPC5OSA6NMA1 111 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 NPIPA5E9PKD4 350 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 SLCO1B7G3V0H7 640 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 KLRC4-KLRK1H3BQV0 150 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 TO15178 435 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 HS6ST1O60243 411 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 SCN2BO60939 215 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 UGT2B11O75310 529 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 ERN1O75460 977 aaKnown RBP8.91□□□□□ -0.98
HDAC3-208ENST00000476739 ZIC2O95409 532 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-208ENST00000476739 C6orf47O95873 294 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 CRYABP02511 175 aaKnown RBP8.91□□□□□ -0.98
HDAC3-208ENST00000476739 EDN3P14138 238 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 PRPS1L1P21108 318 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 CNR1P21554 472 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 IL12AP29459 219 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 GPC1P35052 558 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 KCNK10P57789 538 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 HSF1Q00613 529 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 ALDH6A1Q02252 535 aaKnown RBP8.91□□□□□ -0.98
HDAC3-208ENST00000476739 KCNC4Q03721 635 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 PLCXD2Q0VAA5 305 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 ZNF155Q12901 538 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-208ENST00000476739 PGS1Q32NB8 556 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 HSP90B2PQ58FF3 399 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 SLC22A10Q63ZE4 541 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 NXNQ6DKJ4 435 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 OR4F3Q6IEY1 312 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 EPGNQ6UW88 154 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 SLC44A2Q8IWA5 706 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-208ENST00000476739 LRRC34Q8IZ02 419 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 CLECL1Q8IZS7 167 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 FBXW8Q8N3Y1 598 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 FAM98AQ8NCA5 519 aaKnown RBP8.91□□□□□ -0.98
HDAC3-208ENST00000476739 ST6GALNAC3Q8NDV1 305 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 OR52N2Q8NGI0 321 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 DNAJB8Q8NHS0 232 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 SPPL2AQ8TCT8 520 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 HGDQ93099 445 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 TMBIM1Q969X1 311 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 OMA1Q96E52 524 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 FAM120BQ96EK7 910 aaKnown RBP8.91□□□□□ -0.98
HDAC3-208ENST00000476739 HSPBAP1Q96EW2 488 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 GIMAP5Q96F15 307 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 C16orf58Q96GQ5 468 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 MAGEB18Q96M61 343 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 NODALQ96S42 347 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 EBF4Q9BQW3 602 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 DUSP26Q9BV47 211 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 CXorf36Q9H7Y0 433 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 EQTNQ9NQ60 294 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 SACM1LQ9NTJ5 587 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 ACSS1Q9NUB1 689 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-208ENST00000476739 DDX18Q9NVP1 670 aaKnown RBP8.91□□□□□ -0.98
HDAC3-208ENST00000476739 AIG1Q9NVV5 245 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 TUBA8Q9NY65 449 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-208ENST00000476739 TAS2R9Q9NYW1 312 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 NPIPA1Q9UND3 350 aa8.91□□□□□ -0.98
HDAC3-208ENST00000476739 GXYLT2A0PJZ3 443 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 TTC36A6NLP5 189 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 FAM166BA8MTA8 275 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 POLR3GO15318 223 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 TSPAN2O60636 221 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 DIAPH2O60879 1101 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 COQ9O75208 318 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 PPM1BO75688 479 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 GLSO94925 669 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 SLITRK5O94991 958 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 UNC5CO95185 931 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 C1QCP02747 245 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 P04436 131 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 ZNF24P17028 368 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 RPL3P39023 403 aaKnown RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 PTGDSP41222 190 aa8.9□□□□□ -0.98
HDAC3-208ENST00000476739 ZFP36L2P47974 494 aaKnown RBP8.9□□□□□ -0.98
HDAC3-208ENST00000476739 PRKAG1P54619 331 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms