RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 TRA2AQ13595 282 aaKnown RBP eCLIP3.93□□□□□ -1.78
CD55-208ENST00000476590 PCLAFQ15004 111 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 MED22Q15528 200 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 INPP5JQ15735 1006 aaPredicted RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 ADIPOQQ15848 244 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SNAPC1Q16533 368 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 PNLIPRP3Q17RR3 467 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 EXOC3L2Q2M3D2 409 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 TIMM50Q3ZCQ8 353 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 FNBP1LQ5T0N5 605 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 OTUD3Q5T2D3 398 aaPredicted RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 CERCAMQ5T4B2 595 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 NBPF12Q5TAG4 269 aaPredicted RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 ZDHHC20Q5W0Z9 365 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 FBXW9Q5XUX1 488 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ABLIM2Q6H8Q1 611 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 TAPT1Q6NXT6 567 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 MED27Q6P2C8 311 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 CASP12Q6UXS9 341 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 TIFABQ6ZNK6 161 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 RNF165Q6ZSG1 346 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ERN2Q76MJ5 926 aaKnown RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 SSX6Q7RTT6 188 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 TMCO2Q7Z6W1 182 aaPredicted RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 RANBP3LQ86VV4 465 aaPredicted RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 RFX6Q8HWS3 928 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SPPL2CQ8IUH8 684 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SERPINA12Q8IW75 414 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SULF2Q8IWU5 870 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 FTMTQ8N4E7 242 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ZNF283Q8N7M2 679 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 C15orf54Q8N8G6 183 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 MFSD9Q8NBP5 474 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 CCDC54Q8NEL0 328 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 MAPK15Q8TD08 544 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 LRRC15Q8TF66 581 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SELENOMQ8WWX9 145 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 TFAP2BQ92481 460 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SLC35C1Q96A29 364 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 UPRTQ96BW1 309 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SHISA4Q96DD7 197 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 CALML4Q96GE6 196 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 FAM84AQ96KN4 292 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 AMDHD1Q96NU7 426 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 WFIKKN1Q96NZ8 548 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 SLITRK1Q96PX8 696 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 MBOAT4Q96T53 435 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 PCDHB18PQ96TA0 734 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 PKMYT1Q99640 499 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 EBNA1BP2Q99848 306 aaKnown RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 EGFL8Q99944 293 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 PIGQQ9BRB3 760 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 POLDIP3Q9BY77 421 aaKnown RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 MCOLN1Q9GZU1 580 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 FBXO44Q9H4M3 255 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 BCAS3Q9H6U6 928 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ACSS1Q9NUB1 689 aaPredicted RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 BABAM1Q9NWV8 329 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 TAS2R3Q9NYW6 316 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 PDP1Q9P0J1 537 aaPredicted RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 STOX2Q9P2F5 926 aaPredicted RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 NLKQ9UBE8 527 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 MRTO4Q9UKD2 239 aaKnown RBP3.93□□□□□ -1.78
CD55-208ENST00000476590 ZDHHC8Q9ULC8 765 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 CMAHPQ9Y471 501 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 PCDHA9Q9Y5H5 950 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 GPR45Q9Y5Y3 372 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 CLCA3PQ9Y6N3 262 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 ADAMTSL3P82987 1691 aa3.93□□□□□ -1.78
CD55-208ENST00000476590 TET3O43151 1660 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 MEIKINA0A087WXM9 373 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 TRAV19A0A0A6YYK7 116 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 LOC100130705A0A1B0GUX0 176 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 LRIT2A6NDA9 550 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 TMEM200CA6NKL6 621 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 COLCA2A8K830 154 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 METTL12A8MUP2 240 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 KCNU1A8MYU2 1149 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 GPR31O00270 319 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 SYT5O00445 386 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 FFAR3O14843 346 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 GPR42O15529 346 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 LYRM1O43325 122 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 OR10H3O60404 316 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 PRAMEF2O60811 474 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 DDNO94850 711 aaPredicted RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 IFNA17P01571 189 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 PPBPP02775 128 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 CD2P06729 351 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 GJB1P08034 283 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 SPARCP09486 303 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 CTXN2P0C2S0 81 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 FOSL2P15408 326 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 ZNF14P17017 642 aaPredicted RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 RCC1P18754 421 aaPredicted RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 NT5EP21589 574 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 FSHRP23945 695 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 AKAP5P24588 427 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 ADH6P28332 368 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 GDNFP39905 211 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms