RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SLC26A1Q9H2B4 701 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 MAGEF1Q9HAY2 307 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 YJEFN3A6XGL0 299 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 PSMD3O43242 534 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 APBB3O95704 486 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 TXNDC12O95881 172 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 GOT2P00505 430 aaKnown RBP4.62□□□□□ -1.67
SMC5-203ENST00000475540 OPN1MWP04001 364 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 OPN1MW2P0DN77 364 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 OPN1MW3P0DN78 364 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 ACP1P24666 158 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 ARHGDIAP52565 204 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 ARFIP1P53367 373 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 MFAP2P55001 183 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 CEP55Q53EZ4 464 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 MPPE1Q53F39 396 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 RGS9BPQ6ZS82 235 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 OR6M1Q8NGM8 313 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 RNASE8Q8TDE3 154 aaKnown RBP4.62□□□□□ -1.67
SMC5-203ENST00000475540 EPSTI1Q96J88 318 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 CAPNS2Q96L46 248 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 FAM213AQ9BRX8 229 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 RIBC2Q9H4K1 309 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 NGBQ9NPG2 151 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 ZNF275Q9NSD4 429 aaPredicted RBP4.62□□□□□ -1.67
SMC5-203ENST00000475540 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
SMC5-203ENST00000475540 GPR89AB7ZAQ6 455 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 ANGPT2O15123 496 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 PALMO75781 387 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 AKR7A3O95154 331 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 NUDT14O95848 222 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 GPR89BP0CG08 455 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 HSPA5P11021 654 aaKnown RBP4.61□□□□□ -1.67
SMC5-203ENST00000475540 PGAM2P15259 253 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 TDO2P48775 406 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 HNMTP50135 292 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 MEOX2P50222 304 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 SLC25A1P53007 311 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 GALK2Q01415 458 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 PAX2Q02962 417 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 SCGB2A2Q13296 93 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 FAM219BQ5XKK7 198 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 RHBDD2Q6NTF9 364 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 SLC25A24Q6NUK1 477 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 AFTPHQ6ULP2 937 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 APOOLQ6UXV4 268 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 C1orf186Q6ZWK4 172 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 SLC34A3Q8N130 599 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 SIDT2Q8NBJ9 832 aaKnown RBP4.61□□□□□ -1.67
SMC5-203ENST00000475540 ZNF671Q8TAW3 534 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 VN1R17PQ8TDU5 208 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 DDX50Q9BQ39 737 aaKnown RBP4.61□□□□□ -1.67
SMC5-203ENST00000475540 ST6GALNAC5Q9BVH7 336 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 DEFB126Q9BYW3 111 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 DDX47Q9H0S4 455 aaKnown RBP4.61□□□□□ -1.67
SMC5-203ENST00000475540 GANQ9H2C0 597 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 IMPAD1Q9NX62 359 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 ANKMY1Q9P2S6 941 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 CLEC4EQ9ULY5 219 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 HPCAL4Q9UM19 191 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 PLEKHA6Q9Y2H5 1048 aa4.61□□□□□ -1.67
SMC5-203ENST00000475540 PRRC2AP48634 2157 aaKnown RBP4.61□□□□□ -1.67
SMC5-203ENST00000475540 IGHV3OR16-12A0A075B7B8 117 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 RIPK2O43353 540 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 GMNNO75496 209 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 STBD1O95210 358 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 SNX4O95219 450 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 DIRAS3O95661 229 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 PTBP3O95758 552 aaKnown RBP4.6□□□□□ -1.67
SMC5-203ENST00000475540 FCER2P06734 321 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 TSPY4P0CV99 314 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 TSPY10P0CW01 314 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 DNAJB1P25685 340 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 DRD3P35462 400 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 MDH1P40925 334 aaKnown RBP4.6□□□□□ -1.67
SMC5-203ENST00000475540 MDH2P40926 338 aaKnown RBP4.6□□□□□ -1.67
SMC5-203ENST00000475540 MAGEA9P43362 315 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 TNFRSF4P43489 277 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 SMSP52788 366 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 KARSQ15046 597 aaKnown RBP4.6□□□□□ -1.67
SMC5-203ENST00000475540 MICAQ29983 383 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 RAET1GQ6H3X3 334 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 RTL6Q6ICC9 239 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 OR6B2Q6IFH4 312 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 MOB2Q70IA6 237 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 TAF8Q7Z7C8 310 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 SYVN1Q86TM6 617 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 VASH2Q86V25 355 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 LINC00518Q8N0U6 118 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 ZNF525Q8N782 197 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 DTD2Q96FN9 168 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 C19orf43Q9BQ61 176 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 THUMPD2Q9BTF0 503 aaKnown RBP4.6□□□□□ -1.67
SMC5-203ENST00000475540 RAB17Q9H0T7 212 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 TSPYL1Q9H0U9 437 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 DDX28Q9NUL7 540 aaKnown RBP4.6□□□□□ -1.67
SMC5-203ENST00000475540 TMOD2Q9NZR1 351 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 DNPEPQ9ULA0 475 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 ATG4BQ9Y4P1 393 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 UBE4BO95155 1302 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms