RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 LYRM4Q9HD34 91 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 KCMF1Q9P0J7 381 aa14.52□□□□□ -0.09
CPSF3-203ENST00000475482 GTF3C1Q12789 2109 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 PCNX1Q96RV3 2341 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 TMPRSS11DO60235 418 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 RASAL1O95294 804 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 STSP08842 583 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 LAMP1P11279 417 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 PPIBP23284 216 aaKnown RBP14.51□□□□□ -0.09
CPSF3-203ENST00000475482 CERS1P27544 350 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 ALDH9A1P49189 494 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 LIM2P55344 173 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 ZNF766Q5HY98 468 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 LRIF1Q5T3J3 769 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 NDUFAF5Q5TEU4 345 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 PGM2L1Q6PCE3 622 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 ZNF793Q6ZN11 406 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 RPS19BP1Q86WX3 136 aaKnown RBP14.51□□□□□ -0.09
CPSF3-203ENST00000475482 TICAM1Q8IUC6 712 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 ZNF595Q8IYB9 648 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 SAMD14Q8IZD0 417 aaPredicted RBP14.51□□□□□ -0.09
CPSF3-203ENST00000475482 FAM13CQ8NE31 585 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 CCDC115Q96NT0 180 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 SIGLEC12Q96PQ1 595 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 GIMAP4Q9NUV9 329 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 TAS2R7Q9NYW3 318 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 TMEM181Q9P2C4 612 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 ABCD2Q9UBJ2 740 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 PLEKHB1Q9UF11 243 aaPredicted RBP14.51□□□□□ -0.09
CPSF3-203ENST00000475482 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.51□□□□□ -0.09
CPSF3-203ENST00000475482 CORO2BQ9UQ03 480 aa14.51□□□□□ -0.09
CPSF3-203ENST00000475482 SYNDIG1LA6NDD5 238 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 FXYD1O00168 92 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 CLDN4O14493 209 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 NEURL1O76050 574 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 CRYABP02511 175 aaKnown RBP14.5□□□□□ -0.09
CPSF3-203ENST00000475482 ZCCHC18P0CG32 403 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 SLC6A2P23975 617 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 MST1P26927 711 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 TRHRP34981 398 aaPredicted RBP14.5□□□□□ -0.09
CPSF3-203ENST00000475482 SLC7A2P52569 658 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 EEFSECP57772 596 aaKnown RBP14.5□□□□□ -0.09
CPSF3-203ENST00000475482 MLF1P58340 268 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 C4orf17Q53FE4 359 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 PIGGQ5H8A4 983 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 DLEU7Q6UYE1 221 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 ZNF227Q86WZ6 799 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 FAM47BQ8NA70 645 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 B3GNT7Q8NFL0 401 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 TNIP2Q8NFZ5 429 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 ZFP28Q8NHY6 868 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 SUN3Q8TAQ9 357 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 ZBED6CLQ96FA7 236 aaPredicted RBP14.5□□□□□ -0.09
CPSF3-203ENST00000475482 C5orf34Q96MH7 638 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 ANKRD27Q96NW4 1050 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 CSF3RQ99062 836 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 UTP23Q9BRU9 249 aaKnown RBP14.5□□□□□ -0.09
CPSF3-203ENST00000475482 MUC13Q9H3R2 512 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 CDCP1Q9H5V8 836 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 PRTFDC1Q9NRG1 225 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 SUCOQ9UBS9 1254 aaKnown RBP14.5□□□□□ -0.09
CPSF3-203ENST00000475482 SLC7A8Q9UHI5 535 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 ZNF223Q9UK11 482 aaPredicted RBP14.5□□□□□ -0.09
CPSF3-203ENST00000475482 FBXW2Q9UKT8 454 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 ASB4Q9Y574 426 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 PCDHA9Q9Y5H5 950 aa14.5□□□□□ -0.09
CPSF3-203ENST00000475482 A0A1W2PRB8 838 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 EVPLLA8MZ36 301 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 PDPK1O15530 556 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 PROM1O43490 865 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 CTNSO60931 367 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 NR2F6P10588 404 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 CPN2P22792 545 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 NTSP30990 170 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 WNT3P56703 355 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 PHC1P78364 1004 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 ELF3P78545 371 aaPredicted RBP14.49□□□□□ -0.09
CPSF3-203ENST00000475482 BNIP2Q12982 314 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 CAPRIN1Q14444 709 aaKnown RBP14.49□□□□□ -0.09
CPSF3-203ENST00000475482 OR1C1Q15619 314 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 ZNF468Q5VIY5 522 aaPredicted RBP14.49□□□□□ -0.09
CPSF3-203ENST00000475482 C1orf146Q5VVC0 180 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 SPINK14Q6IE38 97 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 NANOGP8Q6NSW7 305 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 ECSITQ9BQ95 431 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 PAIP1Q9H074 479 aaKnown RBP14.49□□□□□ -0.09
CPSF3-203ENST00000475482 NANOGQ9H9S0 305 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 NEUROD4Q9HD90 331 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 SERHLQ9NQF3 203 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 ACSS1Q9NUB1 689 aaPredicted RBP14.49□□□□□ -0.09
CPSF3-203ENST00000475482 TEX10Q9NXF1 929 aaPredicted RBP14.49□□□□□ -0.09
CPSF3-203ENST00000475482 EXO1Q9UQ84 846 aaKnown RBP14.49□□□□□ -0.09
CPSF3-203ENST00000475482 ENTPD4Q9Y227 616 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 MRPS33Q9Y291 106 aaKnown RBP14.49□□□□□ -0.09
CPSF3-203ENST00000475482 CROCCQ5TZA2 2017 aa14.49□□□□□ -0.09
CPSF3-203ENST00000475482 NOTCH2Q04721 2471 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 SCN2BO60939 215 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 PDE5AO76074 875 aa14.48□□□□□ -0.09
CPSF3-203ENST00000475482 CPSF4O95639 269 aaKnown RBP14.48□□□□□ -0.09
CPSF3-203ENST00000475482 HSD17B1P14061 328 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms