RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PDP1Q9P0J1 537 aaPredicted RBP18.49■□□□□ 0.55
SSR1-204ENST00000474597 PDP2Q9P2J9 529 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 SRPK3Q9UPE1 567 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 ENPP4Q9Y6X5 453 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 MUC3AQ02505 3323 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 A8MVJ9 347 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 TNFRSF11BO00300 401 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 DNAJB5O75953 348 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 ALPPP05187 535 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 CAPGP40121 348 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 ZNF155Q12901 538 aaPredicted RBP18.49■□□□□ 0.55
SSR1-204ENST00000474597 DSG2Q14126 1118 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 DUSP5Q16690 384 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 ZIK1Q3SY52 487 aaPredicted RBP18.49■□□□□ 0.55
SSR1-204ENST00000474597 SLC36A3Q495N2 470 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 MLIPQ5VWP3 458 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 HEPHL1Q6MZM0 1159 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 DGAT2L6Q6ZPD8 337 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 CHERPQ8IWX8 916 aaKnown RBP18.49■□□□□ 0.55
SSR1-204ENST00000474597 KIF17Q9P2E2 1029 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 MMACHCQ9Y4U1 282 aa18.49■□□□□ 0.55
SSR1-204ENST00000474597 TGFBR3LH3BV60 316 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 AGRPO00253 132 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 JRKO75564 520 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 LYNP07948 512 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 RHCEP18577 417 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 STT3AP46977 705 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 CHRNEQ04844 493 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 CLPPQ16740 277 aaPredicted RBP18.48■□□□□ 0.55
SSR1-204ENST00000474597 ARHGAP11BQ3KRB8 267 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 PHF19Q5T6S3 580 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 ARHGAP40Q5TG30 622 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 C1orf189Q5VU69 101 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 TCEAL6Q6IPX3 200 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 TSEN54Q7Z6J9 526 aaKnown RBP18.48■□□□□ 0.55
SSR1-204ENST00000474597 CARM1Q86X55 608 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 TCEAL3Q969E4 200 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 PTCHD1Q96NR3 888 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 OR6C1Q96RD1 312 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 STACQ99469 402 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 PIP5K1AQ99755 562 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 GABARAPL1Q9H0R8 117 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 SLC38A1Q9H2H9 487 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 SCOCQ9UIL1 159 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 C3orf18Q9UK00 162 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 SLC13A4Q9UKG4 626 aa18.48■□□□□ 0.55
SSR1-204ENST00000474597 OR2W5A6NFC9 320 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 PRAMEF25A6NGN4 478 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 CBX7O95931 251 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 TNNI3P19429 210 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 GRK6P43250 576 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 GCGRP47871 477 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 PDX1P52945 283 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 RAD23AP54725 363 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 CDH12P55289 794 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 LAPTM4AQ15012 233 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 ZNHIT3Q15649 155 aaPredicted RBP18.47■□□□□ 0.55
SSR1-204ENST00000474597 RFX4Q33E94 735 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 MINDY4Q4G0A6 757 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 UGT2A3Q6UWM9 527 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 CYP4Z1Q86W10 505 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 COX18Q8N8Q8 333 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 VANGL1Q8TAA9 524 aaPredicted RBP18.47■□□□□ 0.55
SSR1-204ENST00000474597 GPR151Q8TDV0 419 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 PINK1Q9BXM7 581 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 NECTIN3Q9NQS3 549 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 DUSP22Q9NRW4 184 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 UBAP1Q9NZ09 502 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 SLC9A8Q9Y2E8 581 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 WDR45Q9Y484 360 aa18.47■□□□□ 0.55
SSR1-204ENST00000474597 SOX30O94993 753 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 PABPC4LP0CB38 370 aaKnown RBP18.46■□□□□ 0.55
SSR1-204ENST00000474597 PGDP52209 483 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 GK3PQ14409 553 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 ZNF267Q14586 743 aaPredicted RBP18.46■□□□□ 0.55
SSR1-204ENST00000474597 PUM1Q14671 1186 aaKnown RBP eCLIP18.46■□□□□ 0.551e-9■■□□□ 13.6
SSR1-204ENST00000474597 ZNF311Q5JNZ3 666 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 TMEM154Q6P9G4 183 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 ZNF555Q8NEP9 628 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 CNDP2Q96KP4 475 aaKnown RBP18.46■□□□□ 0.55
SSR1-204ENST00000474597 ZNF578Q96N58 590 aaPredicted RBP18.46■□□□□ 0.55
SSR1-204ENST00000474597 CNPPD1Q9BV87 410 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 RARRES3Q9UL19 164 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 LYVE1Q9Y5Y7 322 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 R4GN57 208 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 H0YAE9 185 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 J3KTA2 159 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 LDOC1O95751 146 aaPredicted RBP18.46■□□□□ 0.55
SSR1-204ENST00000474597 AK1P00568 194 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 ZNF883P0CG24 379 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 IGFBP5P24593 272 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 DEF8Q6ZN54 512 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 HMGN2P46Q86SG4 172 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 ATG16L2Q8NAA4 619 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 C7orf57Q8NEG2 295 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 OR52J3Q8NH60 311 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 QRSL1Q9H0R6 528 aaKnown RBP18.46■□□□□ 0.55
SSR1-204ENST00000474597 TOR3AQ9H497 397 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 LANCL2Q9NS86 450 aa18.46■□□□□ 0.55
SSR1-204ENST00000474597 SATB2Q9UPW6 733 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms