RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 TMEM52Q8NDY8 209 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 FAM46DQ8NEK8 389 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 C9orf43Q8TAL5 461 aaPredicted RBP9.19□□□□□ -0.94
USP39-214ENST00000474572 ADAMTS15Q8TE58 950 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 DIO2Q92813 273 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 KAT2AQ92830 837 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 FGF11Q92914 225 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 MYDGFQ969H8 173 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 OTUB1Q96FW1 271 aaPredicted RBP9.19□□□□□ -0.94
USP39-214ENST00000474572 ZNF285Q96NJ3 590 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 GAS2L1Q99501 681 aaPredicted RBP9.19□□□□□ -0.94
USP39-214ENST00000474572 COPS4Q9BT78 406 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 DCUN1D5Q9BTE7 237 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 SAP130Q9H0E3 1048 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 PIGUQ9H490 435 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 LMAN1LQ9HAT1 526 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 SLC25A19Q9HC21 320 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 NECTIN3Q9NQS3 549 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 SATB2Q9UPW6 733 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 IFT52Q9Y366 437 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 HEMK1Q9Y5R4 338 aaPredicted RBP9.19□□□□□ -0.94
USP39-214ENST00000474572 SPACA6W5XKT8 324 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 CDH23Q9H251 3354 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 SCN3AQ9NY46 2000 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 CCDC85CA6NKD9 419 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 SLC22A1O15245 554 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 FGF17O60258 216 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 OR10H3O60404 316 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 GPR75O95800 540 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 FADS2O95864 444 aaKnown RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 BCL10O95999 233 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 THBS1P07996 1170 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 GUSBP08236 651 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 POU2F1P14859 743 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 ST6GAL1P15907 406 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 ZNF182P17025 639 aaPredicted RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 CNR2P34972 360 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 CTSKP43235 329 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 GABRA4P48169 554 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 IDH2P48735 452 aaKnown RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 ST13P50502 369 aaKnown RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 PDX1P52945 283 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 STARD6P59095 220 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 PPP1CAP62136 330 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 HPCAP84074 193 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 MGAT2Q10469 447 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 PIN1Q13526 163 aaPredicted RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 DCTN2Q13561 401 aaKnown RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 SPCS2Q15005 226 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 PRICKLE4Q2TBC4 344 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 ZNF542PQ5EBM4 170 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 ZNF311Q5JNZ3 666 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 ENTPD8Q5MY95 495 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 SLC25A30Q5SVS4 291 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 C6orf132Q5T0Z8 1188 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 COL13A1Q5TAT6 717 aaPredicted RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 TYW3Q6IPR3 259 aaKnown RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 PODNL1Q6PEZ8 512 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 ZER1Q7Z7L7 766 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 MRGPREQ86SM8 312 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 P2RY8Q86VZ1 359 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 VRK2Q86Y07 508 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 FRMD1Q8N878 549 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 C19orf47Q8N9M1 422 aaKnown RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 SLC16A11Q8NCK7 471 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 CADM4Q8NFZ8 388 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 CEP192Q8TEP8 1941 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 TRUB1Q8WWH5 349 aaKnown RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 CTHRC1Q96CG8 243 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 STACQ99469 402 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 CDCA4Q9BXL8 241 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 POLR2J2Q9GZM3 115 aaKnown RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 ZNF350Q9GZX5 532 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 KLHL25Q9H0H3 589 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 POLR2J3Q9H1A7 115 aaKnown RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 TRIM45Q9H8W5 580 aaPredicted RBP9.18□□□□□ -0.94
USP39-214ENST00000474572 ANKRA2Q9H9E1 313 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 FAM60AQ9NP50 221 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 DUSP22Q9NRW4 184 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 IMPAD1Q9NX62 359 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 MAT2BQ9NZL9 334 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 SLC6A14Q9UN76 642 aa9.18□□□□□ -0.94
USP39-214ENST00000474572 EML5Q05BV3 1969 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 A0A087WUU8 490 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 EFCAB10A6NFE3 127 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 M0R082 166 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 TLR4O00206 839 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 HCRTR1O43613 425 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 TPST2O60704 377 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 NME6O75414 186 aaPredicted RBP9.17□□□□□ -0.94
USP39-214ENST00000474572 AK1P00568 194 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 LCKP06239 509 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 GSTM3P21266 225 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 MMP11P24347 488 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 CD38P28907 300 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 GSSP48637 474 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 LIMK1P53667 647 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 MAZP56270 477 aaKnown RBP9.17□□□□□ -0.94
USP39-214ENST00000474572 OLR1P78380 273 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 IGLV3-21P80748 117 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms