RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 MRPS22P82650 360 aaKnown RBP12.67□□□□□ -0.38
USF1-205ENST00000473969 DUSP8Q13202 625 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 MLC1Q15049 377 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 DPY19L1Q2PZI1 675 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 KRTCAP3Q53RY4 240 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 TBCELQ5QJ74 424 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 FHL5Q5TD97 284 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 ANXA8L1Q5VT79 327 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 GFRALQ6UXV0 394 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 NUP54Q7Z3B4 507 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 SLC22A16Q86VW1 577 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 SLC44A2Q8IWA5 706 aaPredicted RBP12.67□□□□□ -0.38
USF1-205ENST00000473969 SLC34A3Q8N130 599 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 SIMC1Q8NDZ2 872 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 NUP43Q8NFH3 380 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 OR2M7Q8NG81 312 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 OR10G3Q8NGC4 313 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 ACTRT2Q8TDY3 377 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 PAQR8Q8TEZ7 354 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 OMA1Q96E52 524 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 FRMD6Q96NE9 622 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 BTBD9Q96Q07 612 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 SECISBP2Q96T21 854 aaKnown RBP12.67□□□□□ -0.38
USF1-205ENST00000473969 BARD1Q99728 777 aaKnown RBP12.67□□□□□ -0.38
USF1-205ENST00000473969 CLMPQ9H6B4 373 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 NEUROD4Q9HD90 331 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 Q9N2J8 555 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 SLCO1B3Q9NPD5 702 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 EQTNQ9NQ60 294 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 GPR55Q9Y2T6 319 aaPredicted RBP12.67□□□□□ -0.38
USF1-205ENST00000473969 CROCCQ5TZA2 2017 aa12.67□□□□□ -0.38
USF1-205ENST00000473969 NPIPA5E9PKD4 350 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 G3V3Y1 287 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 TO15178 435 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 UBDO15205 165 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 POLR3GO15318 223 aaPredicted RBP12.66□□□□□ -0.38
USF1-205ENST00000473969 HS6ST1O60243 411 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 ABCB7O75027 752 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 PPM1BO75688 479 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 CBX6O95503 412 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 ABCB1P08183 1280 aaPredicted RBP12.66□□□□□ -0.38
USF1-205ENST00000473969 CCL3P10147 92 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 IDO1P14902 403 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 EFNA1P20827 205 aaPredicted RBP12.66□□□□□ -0.38
USF1-205ENST00000473969 SOX18P35713 384 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 PIGAP37287 484 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 KIR3DL1P43629 444 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 PRIM2P49643 509 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 PSMD4P55036 377 aaKnown RBP12.66□□□□□ -0.38
USF1-205ENST00000473969 NME5P56597 212 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 FBXW4P57775 412 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 MRPL49Q13405 166 aaKnown RBP12.66□□□□□ -0.38
USF1-205ENST00000473969 EFR3AQ14156 821 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 GSTA3Q16772 222 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 SLC9B1Q4ZJI4 515 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 PRAMEF20Q5VT98 475 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 TMEM198Q66K66 360 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 BHLHB9Q6PI77 547 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 PAOXQ6QHF9 649 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 LYPD8Q6UX82 237 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 RGS9BPQ6ZS82 235 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 RIMKLAQ8IXN7 391 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 FBXW8Q8N3Y1 598 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 PRR7Q8TB68 274 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 TMBIM1Q969X1 311 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 MOAP1Q96BY2 351 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 TMCO6Q96DC7 493 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 CHMP6Q96FZ7 201 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 JSRP1Q96MG2 331 aaPredicted RBP12.66□□□□□ -0.38
USF1-205ENST00000473969 VSTM2LQ96N03 204 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 SLX1AQ9BQ83 275 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 DOHHQ9BU89 302 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 METTL7AQ9H8H3 244 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 ZCCHC3Q9NUD5 404 aaKnown RBP12.66□□□□□ -0.38
USF1-205ENST00000473969 AIG1Q9NVV5 245 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 BOKQ9UMX3 212 aaPredicted RBP12.66□□□□□ -0.38
USF1-205ENST00000473969 NPIPA1Q9UND3 350 aa12.66□□□□□ -0.38
USF1-205ENST00000473969 HELZ2Q9BYK8 2649 aaKnown RBP12.66□□□□□ -0.38
USF1-205ENST00000473969 UNC5CO95185 931 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 C6orf47O95873 294 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 MST1P26927 711 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 S100A3P33764 101 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 SOAT1P35610 550 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 RFC3P40938 356 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 MASP1P48740 699 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 CDK9P50750 372 aaKnown RBP12.65□□□□□ -0.38
USF1-205ENST00000473969 CORO7P57737 925 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 STX1BP61266 288 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 PPIAP62937 165 aaKnown RBP12.65□□□□□ -0.38
USF1-205ENST00000473969 DECR1Q16698 335 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 CYP27C1Q4G0S4 372 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 ZNF324BQ6AW86 544 aaPredicted RBP12.65□□□□□ -0.38
USF1-205ENST00000473969 ZCCHC12Q6PEW1 402 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 EPGNQ6UW88 154 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 BNC2Q6ZN30 1099 aaPredicted RBP12.65□□□□□ -0.38
USF1-205ENST00000473969 CAMKMTQ7Z624 323 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 PACS2Q86VP3 889 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 CDRT4Q8N9R6 151 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 ZFP62Q8NB50 900 aaPredicted RBP12.65□□□□□ -0.38
USF1-205ENST00000473969 OR56A1Q8NGH5 318 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms