RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 NME2P1O60361 137 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 CPSF4O95639 269 aaKnown RBP11.45□□□□□ -0.58
DDX56-209ENST00000473924 P04436 131 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 IL6P05231 212 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 PGRP06401 933 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 FBXO45P0C2W1 286 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 NME2P22392 152 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 ABCD3P28288 659 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 IL12AP29459 219 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 CCT3P49368 545 aaKnown RBP11.45□□□□□ -0.58
DDX56-209ENST00000473924 DGKQP52824 942 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 CORO7P57737 925 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 HBA1P69905 142 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 IRX1P78414 480 aaPredicted RBP11.45□□□□□ -0.58
DDX56-209ENST00000473924 PLCXD2Q0VAA5 305 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 SF3A3Q12874 501 aaKnown RBP eCLIP11.45□□□□□ -0.587e-8■■□□□ 11.8
DDX56-209ENST00000473924 INAQ16352 499 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 ZNF791Q3KP31 576 aaPredicted RBP11.45□□□□□ -0.58
DDX56-209ENST00000473924 VPS26BQ4G0F5 336 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 BHLHB9Q6PI77 547 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 PAOXQ6QHF9 649 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 FAM180AQ6UWF9 173 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 ANKRD46Q86W74 232 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 ZNF227Q86WZ6 799 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 CLECL1Q8IZS7 167 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 GOLM1Q8NBJ4 401 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 PSD4Q8NDX1 1056 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 OR56A1Q8NGH5 318 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 CPT1CQ8TCG5 803 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 STON2Q8WXE9 905 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 MOAP1Q96BY2 351 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 FAM120BQ96EK7 910 aaKnown RBP11.45□□□□□ -0.58
DDX56-209ENST00000473924 CHMP6Q96FZ7 201 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 SCMH1Q96GD3 660 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 MS4A4EQ96PG1 132 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 BTBD9Q96Q07 612 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 OR52E6Q96RD3 313 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 TMEM120AQ9BXJ8 343 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 CXorf36Q9H7Y0 433 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 Q9N2J8 555 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 SIRT3Q9NTG7 399 aaPredicted RBP11.45□□□□□ -0.58
DDX56-209ENST00000473924 SACM1LQ9NTJ5 587 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 FAM120CQ9NX05 1096 aaKnown RBP11.45□□□□□ -0.58
DDX56-209ENST00000473924 KALRNO60229 2985 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 TTC36A6NLP5 189 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 KLRC4-KLRK1H3BQV0 150 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 REM1O75628 298 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 PPM1BO75688 479 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 PSMG1O95456 288 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 CT45A8P0DMV1 189 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 CT45A9P0DMV2 189 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 NAGAP17050 411 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 IL12BP29460 328 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 PRIM2P49643 509 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 POLR2JP52435 117 aaKnown RBP11.44□□□□□ -0.58
DDX56-209ENST00000473924 ARFIP2P53365 341 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 WNT3P56703 355 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 GPR85P60893 370 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 PSPHP78330 225 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 RPP38P78345 283 aaKnown RBP11.44□□□□□ -0.58
DDX56-209ENST00000473924 PHC1P78364 1004 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 TLE1Q04724 770 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 LRRC74AQ0VAA2 488 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 TP53BP2Q13625 1128 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 NTRK2Q16620 822 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 PRR30Q53SZ7 412 aaPredicted RBP11.44□□□□□ -0.58
DDX56-209ENST00000473924 CT45A2Q5DJT8 189 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 SLC22A10Q63ZE4 541 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 LYPD8Q6UX82 237 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 WDR53Q7Z5U6 358 aaPredicted RBP11.44□□□□□ -0.58
DDX56-209ENST00000473924 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.44□□□□□ -0.58
DDX56-209ENST00000473924 SLC34A3Q8N130 599 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 CDRT4Q8N9R6 151 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 OR10G3Q8NGC4 313 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 OR9I1Q8NGQ6 314 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 OR5AK3PQ8NH89 298 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 PSMA8Q8TAA3 256 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 FBXO30Q8TB52 745 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 GPR151Q8TDV0 419 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 SLC9A6Q92581 669 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 JADE3Q92613 823 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 TMBIM1Q969X1 311 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 SNRNP40Q96DI7 357 aaKnown RBP11.44□□□□□ -0.58
DDX56-209ENST00000473924 OMA1Q96E52 524 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 PANX1Q96RD7 426 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 AGPAT4Q9NRZ5 378 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 NTMQ9P121 344 aa11.44□□□□□ -0.58
DDX56-209ENST00000473924 FAM234BA2RU67 622 aa11.43□□□□□ -0.58
DDX56-209ENST00000473924 G3V3Y1 287 aa11.43□□□□□ -0.58
DDX56-209ENST00000473924 TO15178 435 aa11.43□□□□□ -0.58
DDX56-209ENST00000473924 PEX1O43933 1283 aa11.43□□□□□ -0.58
DDX56-209ENST00000473924 KCNH1O95259 989 aa11.43□□□□□ -0.58
DDX56-209ENST00000473924 CRYABP02511 175 aaKnown RBP11.43□□□□□ -0.58
DDX56-209ENST00000473924 HMGN2P05204 90 aaKnown RBP11.43□□□□□ -0.58
DDX56-209ENST00000473924 CCL3P10147 92 aa11.43□□□□□ -0.58
DDX56-209ENST00000473924 CNR1P21554 472 aa11.43□□□□□ -0.58
DDX56-209ENST00000473924 GABRA3P34903 492 aa11.43□□□□□ -0.58
DDX56-209ENST00000473924 MRPL19P49406 292 aaKnown RBP11.43□□□□□ -0.58
DDX56-209ENST00000473924 MEOX1P50221 254 aa11.43□□□□□ -0.58
DDX56-209ENST00000473924 ATP4BP51164 291 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms