RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 GORASP2Q9H8Y8 452 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 IL1RL2Q9HB29 575 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ASCL3Q9NQ33 180 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 DLL4Q9NR61 685 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 NUDT15Q9NV35 164 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 MIOSQ9NXC5 875 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 SAE1Q9UBE0 346 aaPredicted RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 NDRG2Q9UN36 371 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 PPIEQ9UNP9 301 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 KCNIP3Q9Y2W7 256 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 PCDHGA5Q9Y5G8 931 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 PCDHGA1Q9Y5H4 931 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 OTOFQ9HC10 1997 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 KDM4EB2RXH2 506 aaPredicted RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ADAMDEC1O15204 470 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 TXNL1O43396 289 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 EDIL3O43854 480 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 VPS4BO75351 444 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 CBR3O75828 277 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ASGR1P07306 291 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ATXN1LP0C7T5 689 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 CBSLP0DN79 551 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 DPEP1P16444 411 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 PGAM1P18669 254 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 KDELR1P24390 212 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC6A1P30531 599 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 CBSP35520 551 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 OR1G1P47890 313 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 MAN2A2P49641 1150 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 SNRPFP62306 86 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 NHLH2Q02577 135 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 LAIR1Q6GTX8 287 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 C11orf88Q6PI97 169 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 NAA40Q86UY6 237 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 AMIGO3Q86WK7 504 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 LDLRAD3Q86YD5 345 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 RFX6Q8HWS3 928 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 Q8N402 240 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF561Q8N587 486 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 TRAM1L1Q8N609 369 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 COQ8AQ8NI60 647 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 BRI3BPQ8WY22 251 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ROBO4Q8WZ75 1007 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 AP3S1Q92572 193 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF599Q96NL3 588 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 PKMYT1Q99640 499 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 TMEM43Q9BTV4 400 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 GGACTQ9BVM4 153 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC25A32Q9H2D1 315 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ANKRA2Q9H9E1 313 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 C1orf112Q9NSG2 853 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 AKAP7Q9P0M2 348 aaPredicted RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 RBPJLQ9UBG7 517 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 PRSS50Q9UI38 385 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 FBXO10Q9UK96 956 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 CLCA2Q9UQC9 943 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 OAS3Q9Y6K5 1087 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 DENND4AQ7Z401 1863 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 MEX3AA1L020 520 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 A8MXE2 369 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF670-ZNF695F2Z2N8 137 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 NBNO60934 754 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 NSA2O95478 260 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 HPP00738 406 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 SERPINA3P01011 423 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 IL1AP01583 271 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 HMGCRP04035 888 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 CRHP06850 196 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 OR4E1P0C645 316 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 SULT1A3P0DMM9 295 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 SULT1A4P0DMN0 295 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 PEPDP12955 493 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 UQCRC2P22695 453 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 DDTP30046 118 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 MAT2AP31153 395 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 STAT5AP42229 794 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 CTSCP53634 463 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 RAG2P55895 527 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 PKIAP61925 76 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 YBX1P67809 324 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 HTRA4P83105 476 aaPredicted RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 MAD2L1Q13257 205 aaPredicted RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 BIKQ13323 160 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 RBMS2Q15434 407 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF239Q16600 458 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 SYTL3Q4VX76 610 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC35D3Q5M8T2 416 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 C1orf220Q5T0J3 134 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 ATPAF1Q5TC12 328 aaPredicted RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 LILRA6Q6PI73 481 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 CES3Q6UWW8 571 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF534Q76KX8 674 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF720Q7Z2F6 126 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 CMC1Q7Z7K0 106 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 DCUN1D3Q8IWE4 304 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 MYCT1Q8N699 235 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 OR52E4Q8NGH9 312 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 OR5M9Q8NGP3 310 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 OR9I1Q8NGQ6 314 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 OR5J2Q8NH18 312 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms