RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 SUPT3HB4E1H0 165 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 OR7A17O14581 309 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 MSTNO14793 375 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 SUPT3HO75486 399 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 SMNDC1O75940 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 SIX3O95343 332 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 CPMP14384 443 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 HPDP32754 393 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 UGT2B10P36537 528 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 BUD31P41223 144 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 EMDP50402 254 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 XKP51811 444 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 ARL4CP56559 192 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 ATP6V0D1P61421 351 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 VSNL1P62760 191 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 SIRPAP78324 504 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 HMGCS1Q01581 520 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 SLC7A5Q01650 507 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 TNK1Q13470 666 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 RCAN2Q14206 197 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 GUSBP1Q15486 140 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 CPSF6Q16630 551 aaKnown RBP eCLIP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 OR52E8Q6IFG1 317 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 RPS27LQ71UM5 84 aaKnown RBP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 ZBED8Q8IZ13 594 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 ZNF610Q8N9Z0 462 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 OR52B6Q8NGF0 335 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 OR5M1Q8NGP8 315 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 OR14L1PQ8NHC6 308 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 KCTD4Q8WVF5 259 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 PIGTQ969N2 578 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 ZNF845Q96IR2 970 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 ZNF681Q96N22 645 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 NSUN5Q96P11 429 aaKnown RBP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 GPR78Q96P69 363 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 NPAS1Q99742 590 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 TM9SF2Q99805 663 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 BDH2Q9BUT1 245 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 MRPL1Q9BYD6 325 aaKnown RBP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 METTL7AQ9H8H3 244 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 FARSBQ9NSD9 589 aaKnown RBP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 LYARQ9NX58 379 aaKnown RBP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 NUDT4Q9NZJ9 180 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 OPTCQ9UBM4 332 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 EIF3LQ9Y262 564 aaKnown RBP8.68□□□□□ -1.02
MCF2L-223ENST00000473345 SNX24Q9Y343 169 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 STAB1Q9NY15 2570 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 ATRQ13535 2644 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 PRAMEF25A6NGN4 478 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 FAM171A2A8MVW0 826 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 H0YIV9 168 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 PPP6CO00743 305 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 ARID1AO14497 2285 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 DYRK3O43781 588 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 KERAO60938 352 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 KLK1P06870 262 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 PCSK2P16519 638 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 STMN1P16949 149 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 NT5EP21589 574 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 ECHS1P30084 290 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 HIVEP2P31629 2446 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 FEN1P39748 380 aaKnown RBP8.67□□□□□ -1.02
MCF2L-223ENST00000473345 CD79BP40259 229 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 CORO7P57737 925 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 RAB10P61026 200 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 MRPS35P82673 323 aaKnown RBP8.67□□□□□ -1.02
MCF2L-223ENST00000473345 BIKQ13323 160 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 CUL3Q13618 768 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 TRADDQ15628 312 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 PRSS53Q2L4Q9 553 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 SLC30A6Q6NXT4 461 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 GOLGA7Q7Z5G4 137 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 ATG4DQ86TL0 474 aaPredicted RBP8.67□□□□□ -1.02
MCF2L-223ENST00000473345 MYLK4Q86YV6 388 aaPredicted RBP8.67□□□□□ -1.02
MCF2L-223ENST00000473345 GRAMD2AQ8IUY3 354 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 IFT20Q8IY31 132 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 C17orf47Q8NEP4 570 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 OR4N2Q8NGD1 307 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 OR52R1Q8NGF1 315 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 LILRB1Q8NHL6 650 aaPredicted RBP8.67□□□□□ -1.02
MCF2L-223ENST00000473345 UBE2E3Q969T4 207 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 TMBIM1Q969X1 311 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 PGM2Q96G03 612 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 ZFP3Q96NJ6 502 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 KLHDC3Q9BQ90 382 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 PELOQ9BRX2 385 aaKnown RBP8.67□□□□□ -1.02
MCF2L-223ENST00000473345 RAB17Q9H0T7 212 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 PIGMQ9H3S5 423 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 ZBTB26Q9HCK0 441 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 ZNF701Q9NV72 531 aaPredicted RBP8.67□□□□□ -1.02
MCF2L-223ENST00000473345 TAS2R10Q9NYW0 307 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 GRHL1Q9NZI5 618 aa8.67□□□□□ -1.02
MCF2L-223ENST00000473345 UTP11Q9Y3A2 253 aaKnown RBP8.67□□□□□ -1.02
MCF2L-223ENST00000473345 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-223ENST00000473345 CASKO14936 926 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 TSPAN2O60636 221 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 CBR3O75828 277 aa8.66□□□□□ -1.02
MCF2L-223ENST00000473345 AQP8O94778 261 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms