RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 PHC1P78364 1004 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 MAPKAPK3Q16644 382 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 CT45A2Q5DJT8 189 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 METTL21CQ5VZV1 264 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 ZCCHC12Q6PEW1 402 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 PRICKLE2Q7Z3G6 844 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 NUP43Q8NFH3 380 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 SFXN5Q8TD22 340 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 FAM120BQ96EK7 910 aaKnown RBP19.17■□□□□ 0.66
TOP3A-204ENST00000472959 MS4A4EQ96PG1 132 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 OR52E6Q96RD3 313 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 LMF2Q9BU23 707 aaKnown RBP19.17■□□□□ 0.66
TOP3A-204ENST00000472959 KLHL1Q9NR64 748 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 KLF13Q9Y2Y9 288 aaPredicted RBP19.17■□□□□ 0.66
TOP3A-204ENST00000472959 ABCB1P08183 1280 aaPredicted RBP19.16■□□□□ 0.66
TOP3A-204ENST00000472959 ABCD3P28288 659 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 DGKQP52824 942 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 PRKAG1P54619 331 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 INPP5JQ15735 1006 aaPredicted RBP19.16■□□□□ 0.66
TOP3A-204ENST00000472959 NTRK2Q16620 822 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 SPDYE7PQ495Y7 208 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 VPS26BQ4G0F5 336 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 BHLHB9Q6PI77 547 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 SZRD1Q7Z422 152 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 MDGA2Q7Z553 956 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 SLC44A2Q8IWA5 706 aaPredicted RBP19.16■□□□□ 0.66
TOP3A-204ENST00000472959 CLECL1Q8IZS7 167 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 FAM98AQ8NCA5 519 aaKnown RBP19.16■□□□□ 0.66
TOP3A-204ENST00000472959 PSD4Q8NDX1 1056 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 OR56A1Q8NGH5 318 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 EPN3Q9H201 632 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 RABEP2Q9H5N1 569 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 CXorf36Q9H7Y0 433 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 ZCCHC3Q9NUD5 404 aaKnown RBP19.16■□□□□ 0.66
TOP3A-204ENST00000472959 BTNL2Q9UIR0 455 aa19.16■□□□□ 0.66
TOP3A-204ENST00000472959 COPG1Q9Y678 874 aaKnown RBP19.16■□□□□ 0.66
TOP3A-204ENST00000472959 BSNQ9UPA5 3926 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 FAM234BA2RU67 622 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 KLRC4-KLRK1H3BQV0 150 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 TP53I11O14683 189 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 NME6O75414 186 aaPredicted RBP19.15■□□□□ 0.66
TOP3A-204ENST00000472959 PPM1BO75688 479 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 RASAL1O95294 804 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 POLR2JP52435 117 aaKnown RBP19.15■□□□□ 0.66
TOP3A-204ENST00000472959 CORO7P57737 925 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 PSG6Q00889 435 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 SQLEQ14534 574 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 NNATQ16517 81 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 CYP27C1Q4G0S4 372 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 SLC22A10Q63ZE4 541 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 PAOXQ6QHF9 649 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 NPSR1Q6W5P4 371 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 MSANTD1Q6ZTZ1 278 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 GALNTL5Q7Z4T8 443 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 SLC34A3Q8N130 599 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 CISD2Q8N5K1 135 aaKnown RBP19.15■□□□□ 0.66
TOP3A-204ENST00000472959 CDRT4Q8N9R6 151 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 FAM13CQ8NE31 585 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 OR4A15Q8NGL6 344 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 PAQR8Q8TEZ7 354 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 HOXB13Q92826 284 aaPredicted RBP19.15■□□□□ 0.66
TOP3A-204ENST00000472959 GIMAP5Q96F15 307 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 CHMP6Q96FZ7 201 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 CCDC115Q96NT0 180 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 SECISBP2Q96T21 854 aaKnown RBP19.15■□□□□ 0.66
TOP3A-204ENST00000472959 TMEM120AQ9BXJ8 343 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 HES7Q9BYE0 225 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 SH2D2AQ9NP31 389 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 CNIH4Q9P003 139 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 OR10H1Q9Y4A9 318 aa19.15■□□□□ 0.66
TOP3A-204ENST00000472959 C9JVG2 144 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 SLC28A2O43868 658 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 SOX30O94993 753 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 PRIM2P49643 509 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 ARFIP2P53365 341 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 MLLT10P55197 1068 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 RPP38P78345 283 aaKnown RBP19.14■□□□□ 0.65
TOP3A-204ENST00000472959 PLCXD2Q0VAA5 305 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 CGB2Q6NT52 195 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 MFSD12Q6NUT3 480 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 NUP54Q7Z3B4 507 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 ZNF605Q86T29 641 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 ANKRD46Q86W74 232 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 DNAJB8Q8NHS0 232 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 GOT1L1Q8NHS2 421 aaPredicted RBP19.14■□□□□ 0.65
TOP3A-204ENST00000472959 CPT1CQ8TCG5 803 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 SNRNP40Q96DI7 357 aaKnown RBP19.14■□□□□ 0.65
TOP3A-204ENST00000472959 OMA1Q96E52 524 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 TRIM4Q9C037 500 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 Q9N2J8 555 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 EQTNQ9NQ60 294 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 SACM1LQ9NTJ5 587 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 KLHL14Q9P2G3 628 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 MAP10Q9P2G4 905 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 SMG1Q96Q15 3661 aaKnown RBP19.14■□□□□ 0.65
TOP3A-204ENST00000472959 BAHCC1Q9P281 2608 aa19.14■□□□□ 0.65
TOP3A-204ENST00000472959 CFAP46Q8IYW2 2715 aa19.13■□□□□ 0.65
TOP3A-204ENST00000472959 PEX1O43933 1283 aa19.13■□□□□ 0.65
TOP3A-204ENST00000472959 ABCB7O75027 752 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms