RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 HMOX2P30519 316 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 PPICP45877 212 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 MRPS35P82673 323 aaKnown RBP18.01■□□□□ 0.47
COL9A3-210ENST00000472880 TCHHL1Q5QJ38 904 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-210ENST00000472880 KIF18BQ86Y91 864 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 TMEM151AQ8N4L1 468 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 SIMC1Q8NDZ2 872 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 OR14L1PQ8NHC6 308 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 GOT1L1Q8NHS2 421 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-210ENST00000472880 MBD3L2Q8NHZ7 208 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-210ENST00000472880 ZNF681Q96N22 645 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 ZNF382Q96SR6 550 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 FOXC2Q99958 501 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 CALHM2Q9HA72 323 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 CCM2LQ9NUG4 571 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-210ENST00000472880 FETUBQ9UGM5 382 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 ST6GALNAC2Q9UJ37 374 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 EDARQ9UNE0 448 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 SPG11Q96JI7 2443 aa18.01■□□□□ 0.47
COL9A3-210ENST00000472880 ANKHD1Q8IWZ3 2542 aaKnown RBP18■□□□□ 0.47
COL9A3-210ENST00000472880 GNG14A0A1W2PPG7 69 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 C2orf72A6NCS6 295 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 H0Y3Z8 333 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 PCDH7O60245 1069 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 IL3P08700 152 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 DRD5P21918 477 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 CTSSP25774 331 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 OPRM1P35372 400 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 PTGDSP41222 190 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 EMDP50402 254 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 ZNF678Q5SXM1 525 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 FBXW10Q5XX13 1052 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 POMZP3Q6PJE2 187 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 GPRIN3Q6ZVF9 776 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 CHDHQ8NE62 594 aaPredicted RBP18■□□□□ 0.47
COL9A3-210ENST00000472880 ZNF675Q8TD23 568 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 TMCO6Q96DC7 493 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 MTBPQ96DY7 904 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 COL21A1Q96P44 957 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 TMEM237Q96Q45 408 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 EPB41L4BQ9H329 900 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 GIMAP4Q9NUV9 329 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 HEY2Q9UBP5 337 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 CBLCQ9ULV8 474 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 EXO1Q9UQ84 846 aaKnown RBP18■□□□□ 0.47
COL9A3-210ENST00000472880 DLGAP4Q9Y2H0 992 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 STK38LQ9Y2H1 464 aa18■□□□□ 0.47
COL9A3-210ENST00000472880 KIAA1549Q9HCM3 1950 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 FAM221AA4D161 298 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 TUBAL3A6NHL2 446 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 TO15178 435 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 ABCB7O75027 752 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 REM1O75628 298 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 CBR3O75828 277 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 BCAS2O75934 225 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-210ENST00000472880 DRD2P14416 443 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 DNASE1P24855 282 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 SOX18P35713 384 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 KRT20P35900 424 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 AGFG1P52594 562 aaKnown RBP17.99■□□□□ 0.47
COL9A3-210ENST00000472880 DGKQP52824 942 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 ERCC6LQ2NKX8 1250 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 UNC50Q53HI1 259 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 SPIN4Q56A73 249 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 ZNF628Q5EBL2 1059 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 ENPP6Q6UWR7 440 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 CDC20BQ86Y33 519 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 SAMD14Q8IZD0 417 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-210ENST00000472880 ZPLD1Q8TCW7 415 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 TMBIM1Q969X1 311 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 EXOSC8Q96B26 276 aaKnown RBP17.99■□□□□ 0.47
COL9A3-210ENST00000472880 DTNBP1Q96EV8 351 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 OR2B2Q9GZK3 357 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 CXXC4Q9H2H0 198 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 LIME1Q9H400 295 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 TMEM216Q9P0N5 145 aa17.99■□□□□ 0.47
COL9A3-210ENST00000472880 OR6C70A6NIJ9 312 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 ULK1O75385 1050 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 ERN1O75460 977 aaKnown RBP17.98■□□□□ 0.47
COL9A3-210ENST00000472880 IL18BPO95998 194 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 ABHD2P08910 425 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 TMIGD3P0DMS9 266 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-210ENST00000472880 CPN1P15169 458 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 CHN1P15882 459 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 ACSM2AQ08AH3 577 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 CEBPEQ15744 281 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 ACSM2BQ68CK6 577 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 TIFABQ6ZNK6 161 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 LCA5Q86VQ0 697 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 IFNEQ86WN2 208 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 CCDC116Q8IYX3 515 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 GBP7Q8N8V2 638 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-210ENST00000472880 C9orf106Q8NAJ2 232 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 OR9A2Q8NGT5 310 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 RDH11Q8TC12 318 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 METTL6Q8TCB7 284 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 ERP27Q96DN0 273 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 BTBD9Q96Q07 612 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 TUBA1CQ9BQE3 449 aa17.98■□□□□ 0.47
COL9A3-210ENST00000472880 ACPTQ9BZG2 426 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms