RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ZNF708P17019 499 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 CRYGSP22914 178 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 PTX3P26022 381 aaPredicted RBP8.42□□□□□ -1.06
VCL-204ENST00000472585 CNTFP26441 200 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 TLX1P31314 330 aaPredicted RBP8.42□□□□□ -1.06
VCL-204ENST00000472585 GCKP35557 465 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 BUD31P41223 144 aaPredicted RBP8.42□□□□□ -1.06
VCL-204ENST00000472585 XKP51811 444 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 RAP1GDS1P52306 607 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 ARL4CP56559 192 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 ATP6V0D1P61421 351 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 EEF1A1P68104 462 aaKnown RBP8.42□□□□□ -1.06
VCL-204ENST00000472585 MRPS25P82663 173 aaKnown RBP8.42□□□□□ -1.06
VCL-204ENST00000472585 RUNX1T1Q06455 604 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 EXOSC7Q15024 291 aaKnown RBP8.42□□□□□ -1.06
VCL-204ENST00000472585 CLEC12BQ2HXU8 276 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 PRICKLE4Q2TBC4 344 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 EEF1A1P5Q5VTE0 462 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 ANKRD34AQ69YU3 496 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 FAM180BQ6P0A1 224 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 CMC1Q7Z7K0 106 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 GALNT12Q8IXK2 581 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 KLHL7Q8IXQ5 586 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 TEX9Q8N6V9 391 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 C7orf57Q8NEG2 295 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 C17orf47Q8NEP4 570 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 WDR20Q8TBZ3 569 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 UBTD2Q8WUN7 234 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 FIG4Q92562 907 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 UBE2E3Q969T4 207 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 NXNL1Q96CM4 212 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 FAM111AQ96PZ2 611 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 NAP1L3Q99457 506 aaPredicted RBP8.42□□□□□ -1.06
VCL-204ENST00000472585 RBBP8Q99708 897 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 ITPAQ9BY32 194 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 REG4Q9BYZ8 158 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 OPN3Q9H1Y3 402 aaPredicted RBP8.42□□□□□ -1.06
VCL-204ENST00000472585 LYARQ9NX58 379 aaKnown RBP8.42□□□□□ -1.06
VCL-204ENST00000472585 RNF112Q9ULX5 631 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 SNX12Q9UMY4 172 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 CAPN14A8MX76 684 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 H0Y3Z8 333 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 H0YIV9 168 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 MSTNO14793 375 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 KLF4O43474 513 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 TMCC2O75069 709 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 CBR3O75828 277 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 SMNDC1O75940 238 aaKnown RBP eCLIP8.41□□□□□ -1.06
VCL-204ENST00000472585 SOX30O94993 753 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 CBX7O95931 251 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 CPMP14384 443 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 PAX1P15863 534 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 STMN1P16949 149 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 NAGAP17050 411 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 TCEA1P23193 301 aaKnown RBP8.41□□□□□ -1.06
VCL-204ENST00000472585 UGT2B10P36537 528 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 CD79BP40259 229 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 PCYT1AP49585 367 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 ARFIP1P53367 373 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 SUCLG1P53597 346 aaKnown RBP8.41□□□□□ -1.06
VCL-204ENST00000472585 GAS1P54826 345 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 WDR4P57081 412 aaKnown RBP8.41□□□□□ -1.06
VCL-204ENST00000472585 GPX6P59796 221 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 RAB10P61026 200 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 IRF9Q00978 393 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 HMGCS1Q01581 520 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 MAP4K2Q12851 820 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 GAB1Q13480 694 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 CUL3Q13618 768 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 CPSF6Q16630 551 aaKnown RBP eCLIP8.41□□□□□ -1.06
VCL-204ENST00000472585 KRTAP24-1Q3LI83 254 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 TRMT12Q53H54 448 aaKnown RBP8.41□□□□□ -1.06
VCL-204ENST00000472585 HLA-DQA1Q5Y7H0 255 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 OR5M10Q6IEU7 315 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 SLC30A6Q6NXT4 461 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 SCIMPQ6UWF3 145 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 NUP54Q7Z3B4 507 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 ZBED8Q8IZ13 594 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 ZNF610Q8N9Z0 462 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 ADCY4Q8NFM4 1077 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 OR14L1PQ8NHC6 308 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 OMA1Q96E52 524 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 ZBED6CLQ96FA7 236 aaPredicted RBP8.41□□□□□ -1.06
VCL-204ENST00000472585 PELOQ9BRX2 385 aaKnown RBP8.41□□□□□ -1.06
VCL-204ENST00000472585 C19orf24Q9BVV8 132 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 TRIM31Q9BZY9 425 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 METTL7AQ9H8H3 244 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 ANKRA2Q9H9E1 313 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 MAT2BQ9NZL9 334 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 OPTCQ9UBM4 332 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 CDC42EP3Q9UKI2 254 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 PRR14LQ5THK1 2151 aa8.41□□□□□ -1.06
VCL-204ENST00000472585 TCRBV9S1A1TA0A576 114 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 HMX2A2RU54 273 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 FAM159BA6NKW6 160 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 SUPT3HB4E1H0 165 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 KERAO60938 352 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 SUPT3HO75486 399 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 KLK1P06870 262 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 EPB42P16452 691 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms