RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 ART1P52961 327 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 GAS1P54826 345 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 CKAP4Q07065 602 aaKnown RBP7.35□□□□□ -1.23
USP48-207ENST00000471752 SLC29A2Q14542 456 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 TOMM20Q15388 145 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 HLA-DQA1Q5Y7H0 255 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 METTL2BQ6P1Q9 378 aaKnown RBP7.35□□□□□ -1.23
USP48-207ENST00000471752 SPNS3Q6ZMD2 512 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 TIFABQ6ZNK6 161 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 C22orf34Q6ZV56 151 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 TMEM200AQ86VY9 491 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 TRIM42Q8IWZ5 723 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 VWA5B2Q8N398 1253 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 OR7G1Q8NGA0 311 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 METTL6Q8TCB7 284 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 ABTB1Q969K4 478 aaPredicted RBP7.35□□□□□ -1.23
USP48-207ENST00000471752 C11orf24Q96F05 449 aaPredicted RBP7.35□□□□□ -1.23
USP48-207ENST00000471752 LCORQ96JN0 433 aaPredicted RBP7.35□□□□□ -1.23
USP48-207ENST00000471752 EGLN2Q96KS0 407 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 ART5Q96L15 291 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 TRIB1Q96RU8 372 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 ADOQ96SZ5 270 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 NPAS1Q99742 590 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 RHOXF2Q9BQY4 288 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 PRDM14Q9GZV8 571 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 GSX1Q9H4S2 264 aaPredicted RBP7.35□□□□□ -1.23
USP48-207ENST00000471752 GSTO2Q9H4Y5 243 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 WDR41Q9HAD4 459 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 DNAJB12Q9NXW2 375 aaKnown RBP7.35□□□□□ -1.23
USP48-207ENST00000471752 VPS29Q9UBQ0 182 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 MTRF1LQ9UGC7 380 aaKnown RBP7.35□□□□□ -1.23
USP48-207ENST00000471752 ZNF180Q9UJW8 692 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 UTS2RQ9UKP6 389 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 PLEKHA6Q9Y2H5 1048 aa7.35□□□□□ -1.23
USP48-207ENST00000471752 NSD1Q96L73 2696 aaPredicted RBP7.34□□□□□ -1.23
USP48-207ENST00000471752 A0A087WUV0 522 aaPredicted RBP7.34□□□□□ -1.23
USP48-207ENST00000471752 EXOC1LA0A1B0GW35 172 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 C1orf226A1L170 272 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 SHISA8B8ZZ34 492 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 DYRK3O43781 588 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 TSPAN2O60636 221 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 REM1O75628 298 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 KRT38O76015 456 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 TGM6O95932 706 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 OTCP00480 354 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 IGKV1D-16P01601 117 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 CSNK2A2P19784 350 aaPredicted RBP7.34□□□□□ -1.23
USP48-207ENST00000471752 CAPN3P20807 821 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 EFNA1P20827 205 aaPredicted RBP7.34□□□□□ -1.23
USP48-207ENST00000471752 TACR1P25103 407 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 KIR2DL3P43628 341 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 PPICP45877 212 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 MASP1P48740 699 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 PRKAA2P54646 552 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 B3GALT5-AS1P59052 145 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 PHEXP78562 749 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 TSNAXIP1Q2TAA8 658 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 ANKRD26P1Q6NSI1 321 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 APOOLQ6UXV4 268 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 GPRIN3Q6ZVF9 776 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 NUP54Q7Z3B4 507 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 CCDC91Q7Z6B0 441 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 GALNT10Q86SR1 603 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 PACS2Q86VP3 889 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 CDC20BQ86Y33 519 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 GCNT2Q8N0V5 402 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 EID3Q8N140 333 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 LIX1Q8N485 282 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 CCNYL1Q8N7R7 359 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.34□□□□□ -1.23
USP48-207ENST00000471752 ZBTB9Q96C00 473 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 EFHD2Q96C19 240 aaPredicted RBP7.34□□□□□ -1.23
USP48-207ENST00000471752 TMEM41AQ96HV5 264 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 ZNF597Q96LX8 424 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 VSTM2LQ96N03 204 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 PELOQ9BRX2 385 aaKnown RBP7.34□□□□□ -1.23
USP48-207ENST00000471752 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.34□□□□□ -1.23
USP48-207ENST00000471752 QPCTLQ9NXS2 382 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 AHSPQ9NZD4 102 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 KCNN3Q9UGI6 736 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 CBLCQ9ULV8 474 aa7.34□□□□□ -1.23
USP48-207ENST00000471752 RPH3AQ9Y2J0 694 aaPredicted RBP7.34□□□□□ -1.23
USP48-207ENST00000471752 GXYLT2A0PJZ3 443 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 SYNDIG1LA6NDD5 238 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 AHRRA9YTQ3 701 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 MYO1GB0I1T2 1018 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 SIAH2O43255 324 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 PCDH7O60245 1069 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 ULK1O75385 1050 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 SNX4O95219 450 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 ZWINTO95229 277 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 ESRRBO95718 433 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 JUNP05412 331 aaKnown RBP7.33□□□□□ -1.24
USP48-207ENST00000471752 CYP4B1P13584 511 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 DRD5P21918 477 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 ATP5F1P24539 256 aaPredicted RBP7.33□□□□□ -1.24
USP48-207ENST00000471752 LHX2P50458 406 aa7.33□□□□□ -1.24
USP48-207ENST00000471752 RNF144AP50876 292 aaPredicted RBP7.33□□□□□ -1.24
USP48-207ENST00000471752 SUCLG1P53597 346 aaKnown RBP7.33□□□□□ -1.24
USP48-207ENST00000471752 GFRA1P56159 465 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms