RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GUSBP08236 651 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 HBQ1P09105 142 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 ZNF806P0C7X5 589 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 FGF5P12034 268 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 S1PR1P21453 382 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 FPR1P21462 350 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 DNAJA1P31689 397 aaKnown RBP8.75□□□□□ -1.01
VPS52-216ENST00000471309 RORAP35398 523 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 ALDH3A2P51648 485 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 PPP2R2BQ00005 443 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 ZFP36L1Q07352 338 aaKnown RBP8.75□□□□□ -1.01
VPS52-216ENST00000471309 FUT7Q11130 342 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 ZNF155Q12901 538 aaPredicted RBP8.75□□□□□ -1.01
VPS52-216ENST00000471309 DUSP8Q13202 625 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 MED21Q13503 144 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 ERV3-1Q14264 604 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 GK3PQ14409 553 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 IL11RAQ14626 422 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 EXOSC7Q15024 291 aaKnown RBP8.75□□□□□ -1.01
VPS52-216ENST00000471309 DUSP7Q16829 419 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 NHSL2Q5HYW2 709 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 PRAMEF17Q5VTA0 474 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 COX15Q7KZN9 410 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 TSEN54Q7Z6J9 526 aaKnown RBP8.75□□□□□ -1.01
VPS52-216ENST00000471309 MARVELD2Q8N4S9 558 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 SMYD1Q8NB12 490 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 AGBL5Q8NDL9 886 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 GPR32P1Q8NGA4 272 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 OR52R1Q8NGF1 315 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 RHBDD1Q8TEB9 315 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 SLC9A6Q92581 669 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 PROX1Q92786 737 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 NRBF2Q96F24 287 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 SLC35A4Q96G79 324 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 ZNF354BQ96LW1 612 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 RDH12Q96NR8 316 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 EPYCQ99645 322 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 LMF2Q9BU23 707 aaKnown RBP8.75□□□□□ -1.01
VPS52-216ENST00000471309 SLC7A5P2Q9GIP4 190 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 TGIF2Q9GZN2 237 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 SLC38A1Q9H2H9 487 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 TRIM45Q9H8W5 580 aaPredicted RBP8.75□□□□□ -1.01
VPS52-216ENST00000471309 REEP1Q9H902 201 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 NECTIN3Q9NQS3 549 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 SMPD3Q9NY59 655 aaPredicted RBP8.75□□□□□ -1.01
VPS52-216ENST00000471309 VNN3Q9NY84 501 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 NDUFAF4Q9P032 175 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 KCNE3Q9Y6H6 103 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 USP34Q70CQ2 3546 aa8.75□□□□□ -1.01
VPS52-216ENST00000471309 TCRBV16S1A1N1A0A5B0 115 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 TTC36A6NLP5 189 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 SYT5O00445 386 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 DLGAP1O14490 977 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 CDX4O14627 284 aaPredicted RBP8.74□□□□□ -1.01
VPS52-216ENST00000471309 NME6O75414 186 aaPredicted RBP8.74□□□□□ -1.01
VPS52-216ENST00000471309 DIRAS1O95057 198 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 NKX2-2O95096 273 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 TIAF1O95411 115 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 ONECUT2O95948 504 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 ALPPP05187 535 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 PABPC4LP0CB38 370 aaKnown RBP8.74□□□□□ -1.01
VPS52-216ENST00000471309 CD59P13987 128 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 TNFRSF1BP20333 461 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 PRKAR1BP31321 381 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 CCKBRP32239 447 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 CSTF2P33240 577 aaKnown RBP eCLIP8.74□□□□□ -1.01
VPS52-216ENST00000471309 EMDP50402 254 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 ARHGDIAP52565 204 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 PDX1P52945 283 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 IST1P53990 364 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 RHAGQ02094 409 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 EPS8Q12929 822 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 ZNF267Q14586 743 aaPredicted RBP8.74□□□□□ -1.01
VPS52-216ENST00000471309 ZNHIT3Q15649 155 aaPredicted RBP8.74□□□□□ -1.01
VPS52-216ENST00000471309 ELAVL1Q15717 326 aaKnown RBP8.74□□□□□ -1.01
VPS52-216ENST00000471309 MINDY4Q4G0A6 757 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 DCST2Q5T1A1 773 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 C6orf52Q5T4I8 152 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 SWT1Q5T5J6 900 aaKnown RBP8.74□□□□□ -1.01
VPS52-216ENST00000471309 C1orf189Q5VU69 101 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 MLIPQ5VWP3 458 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 TYW3Q6IPR3 259 aaKnown RBP8.74□□□□□ -1.01
VPS52-216ENST00000471309 PWWP2BQ6NUJ5 590 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 DHRS4L2Q6PKH6 230 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 TBPL2Q6SJ96 375 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 FRRS1Q6ZNA5 592 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 WDR53Q7Z5U6 358 aaPredicted RBP8.74□□□□□ -1.01
VPS52-216ENST00000471309 B3GNT8Q7Z7M8 397 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 TMEM179BQ7Z7N9 219 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 ZNF605Q86T29 641 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 STK32CQ86UX6 486 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 PPP1R3BQ86XI6 285 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 NAXDQ8IW45 347 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 CHERPQ8IWX8 916 aaKnown RBP8.74□□□□□ -1.01
VPS52-216ENST00000471309 COX18Q8N8Q8 333 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 BMPERQ8N8U9 685 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 SUMF1Q8NBK3 374 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 OR7G1Q8NGA0 311 aa8.74□□□□□ -1.01
VPS52-216ENST00000471309 MAGEE2Q8TD90 523 aaPredicted RBP8.74□□□□□ -1.01
VPS52-216ENST00000471309 PMM1Q92871 262 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms