RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ZNF324BQ6AW86 544 aaPredicted RBP18.19■□□□□ 0.5
HDAC7-220ENST00000471235 ACAD11Q709F0 780 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 SULF2Q8IWU5 870 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 SLC34A3Q8N130 599 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 CPSF7Q8N684 471 aaKnown RBP18.19■□□□□ 0.5
HDAC7-220ENST00000471235 CEP70Q8NHQ1 597 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 FAR1Q8WVX9 515 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 OR5P2Q8WZ92 322 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 OMA1Q96E52 524 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 TEX37Q96LM6 180 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 EBF4Q9BQW3 602 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 AGPAT4Q9NRZ5 378 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 OLAHQ9NV23 265 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 NTMQ9P121 344 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 CHCHD2Q9Y6H1 151 aaPredicted RBP18.19■□□□□ 0.5
HDAC7-220ENST00000471235 ESPL1Q14674 2120 aa18.19■□□□□ 0.5
HDAC7-220ENST00000471235 E9PBE3 544 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 G3V3Y1 287 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 POLR3GO15318 223 aaPredicted RBP18.18■□□□□ 0.5
HDAC7-220ENST00000471235 PPM1BO75688 479 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 CRYABP02511 175 aaKnown RBP18.18■□□□□ 0.5
HDAC7-220ENST00000471235 IDO1P14902 403 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 AQP5P55064 265 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 PSG6Q00889 435 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 SRSF11Q05519 484 aaKnown RBP18.18■□□□□ 0.5
HDAC7-220ENST00000471235 PLCXD2Q0VAA5 305 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 RPS6KA2Q15349 733 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 PDCD4Q53EL6 469 aaKnown RBP18.18■□□□□ 0.5
HDAC7-220ENST00000471235 SPANXN4Q5MJ08 99 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 SZRD1Q7Z422 152 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 WDR53Q7Z5U6 358 aaPredicted RBP18.18■□□□□ 0.5
HDAC7-220ENST00000471235 CLECL1Q8IZS7 167 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 FBXW8Q8N3Y1 598 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 NUP43Q8NFH3 380 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 OR8J2Q8NGG1 315 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 OR5M3Q8NGP4 307 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 DNAJB8Q8NHS0 232 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 PSMA8Q8TAA3 256 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 PAQR8Q8TEZ7 354 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 NR4A3Q92570 626 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 FAM120BQ96EK7 910 aaKnown RBP18.18■□□□□ 0.5
HDAC7-220ENST00000471235 MS4A4EQ96PG1 132 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 SLX1AQ9BQ83 275 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 CXorf36Q9H7Y0 433 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 EQTNQ9NQ60 294 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 TCF7L2Q9NQB0 619 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 SACM1LQ9NTJ5 587 aa18.18■□□□□ 0.5
HDAC7-220ENST00000471235 CNOT11Q9UKZ1 510 aaKnown RBP18.18■□□□□ 0.5
HDAC7-220ENST00000471235 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 PINLYPA6NC86 204 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 CAPN14A8MX76 684 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 C9JVG2 144 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 KLRC4-KLRK1H3BQV0 150 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 UBDO15205 165 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 EMC8O43402 210 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 P04436 131 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 MST1P26927 711 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 IL12AP29459 219 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 KIR3DL1P43629 444 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 TDGF1P3P51864 188 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 PHC1P78364 1004 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 GSTA3Q16772 222 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 DPY19L1Q2PZI1 675 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 SLC44A2Q8IWA5 706 aaPredicted RBP18.17■□□□□ 0.5
HDAC7-220ENST00000471235 GALNT11Q8NCW6 608 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 OR2M7Q8NG81 312 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 TMBIM1Q969X1 311 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 GIMAP5Q96F15 307 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 THOC1Q96FV9 657 aaKnown RBP18.17■□□□□ 0.5
HDAC7-220ENST00000471235 LMF2Q9BU23 707 aaKnown RBP18.17■□□□□ 0.5
HDAC7-220ENST00000471235 C3orf14Q9HBI5 128 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 NEUROD4Q9HD90 331 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 GTF3C1Q12789 2109 aa18.17■□□□□ 0.5
HDAC7-220ENST00000471235 RNASET2O00584 256 aaKnown RBP18.16■□□□□ 0.5
HDAC7-220ENST00000471235 SCN2BO60939 215 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 ABCB1P08183 1280 aaPredicted RBP18.16■□□□□ 0.5
HDAC7-220ENST00000471235 NAGAP17050 411 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 RFC3P40938 356 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 PRKAG1P54619 331 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 HBA1P69905 142 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 GUCY1A3Q02108 690 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 FAM174BQ3ZCQ3 159 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 RNFT1Q5M7Z0 435 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 PRAMEF20Q5VT98 475 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 SLC22A10Q63ZE4 541 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 ATCAYQ86WG3 371 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 ZFP62Q8NB50 900 aaPredicted RBP18.16■□□□□ 0.5
HDAC7-220ENST00000471235 POGLUT1Q8NBL1 392 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 SPPL2AQ8TCT8 520 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 HOXB13Q92826 284 aaPredicted RBP18.16■□□□□ 0.5
HDAC7-220ENST00000471235 HGDQ93099 445 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 CCDC28BQ9BUN5 200 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 SDR39U1Q9NRG7 319 aaPredicted RBP18.16■□□□□ 0.5
HDAC7-220ENST00000471235 ZCCHC3Q9NUD5 404 aaKnown RBP18.16■□□□□ 0.5
HDAC7-220ENST00000471235 SNX8Q9Y5X2 465 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 ZNF407Q9C0G0 2248 aa18.16■□□□□ 0.5
HDAC7-220ENST00000471235 DYNC1I1O14576 645 aa18.15■□□□□ 0.5
HDAC7-220ENST00000471235 TP53I11O14683 189 aa18.15■□□□□ 0.5
HDAC7-220ENST00000471235 CFLARO15519 480 aa18.15■□□□□ 0.5
HDAC7-220ENST00000471235 ACP2P11117 423 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms