RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 GRHL2Q6ISB3 625 aa17.11■□□□□ 0.33
NCKIPSD-209ENST00000470006 WFDC8Q8IUA0 241 aa17.11■□□□□ 0.33
NCKIPSD-209ENST00000470006 ANKMY2Q8IV38 441 aa17.11■□□□□ 0.33
NCKIPSD-209ENST00000470006 FIG4Q92562 907 aa17.11■□□□□ 0.33
NCKIPSD-209ENST00000470006 AKAP1Q92667 903 aaKnown RBP eCLIP17.11■□□□□ 0.33
NCKIPSD-209ENST00000470006 TMCO6Q96DC7 493 aa17.11■□□□□ 0.33
NCKIPSD-209ENST00000470006 PLPPR2Q96GM1 343 aa17.11■□□□□ 0.33
NCKIPSD-209ENST00000470006 LCORQ96JN0 433 aaPredicted RBP17.11■□□□□ 0.33
NCKIPSD-209ENST00000470006 ITPAQ9BY32 194 aa17.11■□□□□ 0.33
NCKIPSD-209ENST00000470006 RHOJQ9H4E5 214 aa17.11■□□□□ 0.33
NCKIPSD-209ENST00000470006 ANGPTL3Q9Y5C1 460 aa17.11■□□□□ 0.33
NCKIPSD-209ENST00000470006 PHGDHO43175 533 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 KLF4O43474 513 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 THBDP07204 575 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 PEPDP12955 493 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 CD1DP15813 335 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 DPP4P27487 766 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 EEFSECP57772 596 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 ATP6V0D1P61421 351 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 POU4F1Q01851 419 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 FGFBP1Q14512 234 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 ETFDHQ16134 617 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 STEAP4Q687X5 459 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 MRM1Q6IN84 353 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 TSPAN17Q96FV3 270 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 PINK1Q9BXM7 581 aa17.1■□□□□ 0.33
NCKIPSD-209ENST00000470006 GOLGA6L10A0A0M3HER8 536 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 FRG2CA6NGY1 282 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 EFCAB8A8MWE9 144 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 K7EPI3 171 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 ACOX3O15254 700 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 SEC14L5O43304 696 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 REM1O75628 298 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 CD8BP10966 210 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 PPP3CBP16298 524 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 BSGP35613 385 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 FNTAP49354 379 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 ARFIP1P53367 373 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 HMGCS1Q01581 520 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 EXOSC7Q15024 291 aaKnown RBP17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 BCL2A1Q16548 175 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 PPP4R4Q6NUP7 873 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 NUDT13Q86X67 352 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 PBKQ96KB5 322 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 DDX31Q9H8H2 851 aaKnown RBP17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 NSMCE4AQ9NXX6 385 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 MTO1Q9Y2Z2 717 aaKnown RBP17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 PCDHGA11Q9Y5H2 935 aa17.09■□□□□ 0.33
NCKIPSD-209ENST00000470006 GOLGA6L6A8MZA4 724 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 SUPT3HB4E1H0 165 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 PGRMC1O00264 195 aaKnown RBP17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 SUPT3HO75486 399 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 CGAP01215 116 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 FAM157CP0CG43 387 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 CPMP14384 443 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 PORP16435 677 aaPredicted RBP17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 ACVR1BP36896 505 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 E2F2Q14209 437 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 FAM111BQ6SJ93 734 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 TEX9Q8N6V9 391 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 OR4K17Q8NGC6 315 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 COL21A1Q96P44 957 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 ZNF717Q9BY31 904 aaPredicted RBP17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 AMBRA1Q9C0C7 1298 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 ALG9Q9H6U8 611 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 TEX264Q9Y6I9 313 aa17.08■□□□□ 0.32
NCKIPSD-209ENST00000470006 ZIC3O60481 467 aa17.07■□□□□ 0.32
NCKIPSD-209ENST00000470006 PIAS1O75925 651 aa17.07■□□□□ 0.32
NCKIPSD-209ENST00000470006 DEKP35659 375 aaKnown RBP17.07■□□□□ 0.32
NCKIPSD-209ENST00000470006 CDKN1AP38936 164 aa17.07■□□□□ 0.32
NCKIPSD-209ENST00000470006 RAET1LQ5VY80 246 aa17.07■□□□□ 0.32
NCKIPSD-209ENST00000470006 FNDC9Q8TBE3 224 aa17.07■□□□□ 0.32
NCKIPSD-209ENST00000470006 TMBIM1Q969X1 311 aa17.07■□□□□ 0.32
NCKIPSD-209ENST00000470006 LRRC39Q96DD0 335 aa17.07■□□□□ 0.32
NCKIPSD-209ENST00000470006 NUDT4Q9NZJ9 180 aa17.07■□□□□ 0.32
NCKIPSD-209ENST00000470006 TXNDC16Q9P2K2 825 aa17.07■□□□□ 0.32
NCKIPSD-209ENST00000470006 MRPS18CQ9Y3D5 142 aaKnown RBP17.07■□□□□ 0.32
NCKIPSD-209ENST00000470006 H0YC42 278 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 ALDOAP04075 364 aaKnown RBP17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 STMN1P16949 149 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 S1PR1P21453 382 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 GRK2P25098 689 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 KRT20P35900 424 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 TPD52P55327 224 aaPredicted RBP17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 ARL4CP56559 192 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 CUL3Q13618 768 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 FRG1Q14331 258 aaKnown RBP17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 SLMAPQ14BN4 828 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 PON3Q15166 354 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 CPSF6Q16630 551 aaKnown RBP eCLIP17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 KRTAP24-1Q3LI83 254 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 MILR1Q7Z6M3 343 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 STAG3L4Q8TBR4 150 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 ADOQ96SZ5 270 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 BEX2Q9BXY8 128 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 PRRG4Q9BZD6 226 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 STMN4Q9H169 189 aaPredicted RBP17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 SLCO5A1Q9H2Y9 848 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 RNF122Q9H9V4 155 aa17.06■□□□□ 0.32
NCKIPSD-209ENST00000470006 FANCFQ9NPI8 374 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms