RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 PTAFRP25105 342 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 HNRNPH1P31943 449 aaKnown RBP11.11□□□□□ -0.63
UBR4-210ENST00000466969 HPDP32754 393 aaPredicted RBP11.11□□□□□ -0.63
UBR4-210ENST00000466969 SLC6A8P48029 635 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 B3GALT5-AS1P59052 145 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 COL10A1Q03692 680 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 ITGADQ13349 1161 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 RUSC1-AS1Q66K80 236 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 ZNF549Q6P9A3 640 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 CYHR1Q6ZMK1 362 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 NUP54Q7Z3B4 507 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 TBC1D1Q86TI0 1168 aaPredicted RBP11.11□□□□□ -0.63
UBR4-210ENST00000466969 METTL25Q8N6Q8 603 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 ADCY4Q8NFM4 1077 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 LPGAT1Q92604 370 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 NEIL2Q969S2 332 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 FBXO17Q96EF6 278 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 SMYD2Q9NRG4 433 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 NPAP1Q9NZP6 1156 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 BZW2Q9Y6E2 419 aaKnown RBP11.11□□□□□ -0.63
UBR4-210ENST00000466969 ATP23Q9Y6H3 246 aa11.11□□□□□ -0.63
UBR4-210ENST00000466969 hCG_1818297A0A087WSY0 165 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 A0A087X0T9 212 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 GOLGA6L10A0A0M3HER8 536 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 LRIT2A6NDA9 550 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 PPM1BO75688 479 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 FAM228BP0C875 321 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 ALOX15P16050 662 aaPredicted RBP11.1□□□□□ -0.63
UBR4-210ENST00000466969 NAGAP17050 411 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 CLCN7P51798 805 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 CLDN20P56880 219 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 SNRPD2P62316 118 aaKnown RBP11.1□□□□□ -0.63
UBR4-210ENST00000466969 IGLV3-21P80748 117 aaPredicted RBP11.1□□□□□ -0.63
UBR4-210ENST00000466969 SPOCK1Q08629 439 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 SPRED3Q2MJR0 410 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 MRNIPQ6NTE8 343 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 LEG1Q6P5S2 330 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 SLC46A3Q7Z3Q1 461 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 C1QL2Q7Z5L3 287 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 PALM2Q8IXS6 379 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 OR2L5Q8NG80 312 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 OR51F2Q8NH61 342 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 WFDC12Q8WWY7 111 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 C22orf15Q8WYQ4 148 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 ANKRD7Q92527 254 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 RIT1Q92963 219 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 TSNARE1Q96NA8 513 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 OR4K3Q96R72 315 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 REXO4Q9GZR2 422 aaKnown RBP11.1□□□□□ -0.63
UBR4-210ENST00000466969 PELI2Q9HAT8 420 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 LYRM4Q9HD34 91 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 MYNNQ9NPC7 610 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 MCTS1Q9ULC4 181 aaKnown RBP11.1□□□□□ -0.63
UBR4-210ENST00000466969 CORO1CQ9ULV4 474 aaPredicted RBP11.1□□□□□ -0.63
UBR4-210ENST00000466969 PDE10AQ9Y233 779 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 ZNF337Q9Y3M9 751 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 TCAF1Q9Y4C2 921 aa11.1□□□□□ -0.63
UBR4-210ENST00000466969 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.1□□□□□ -0.637e-9■□□□□ 9.1
UBR4-210ENST00000466969 DYNC2H1Q8NCM8 4307 aaKnown RBP11.1□□□□□ -0.63
UBR4-210ENST00000466969 METTL18O95568 372 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 HIST1H2AGP0C0S8 130 aaPredicted RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 HIST1H2ADP20671 130 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 CNTFP26441 200 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 AGTR1P30556 359 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 EIF1AXP47813 144 aaKnown RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 NPY2RP49146 381 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 DSCR4P56555 118 aaPredicted RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 EIF3EP60228 445 aaKnown RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 MAP4K2Q12851 820 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 CTBP1Q13363 440 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 TRIP10Q15642 601 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 DESI1Q6ICB0 168 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 OR5M10Q6IEU7 315 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 KLHL17Q6TDP4 642 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 CCBE1Q6UXH8 406 aaPredicted RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 PPP1R21Q6ZMI0 780 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 RHOUQ7L0Q8 258 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 PIWIL4Q7Z3Z4 852 aaKnown RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 TMPRSS11BQ86T26 416 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 ST13P4Q8IZP2 240 aaPredicted RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 GBP7Q8N8V2 638 aaPredicted RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 TTLQ8NG68 377 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 OR8K1Q8NGG5 319 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 FAM110DQ8TAY7 271 aaPredicted RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 NANPQ8TBE9 248 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 GTF3AQ92664 365 aaKnown RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 HGDQ93099 445 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 SLC25A28Q96A46 364 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 HIST1H2AHQ96KK5 128 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 HIST1H2AJQ99878 128 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 CITED1Q99966 193 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 PELOQ9BRX2 385 aaKnown RBP11.09□□□□□ -0.63
UBR4-210ENST00000466969 H2AFJQ9BTM1 129 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 DYRK1BQ9Y463 629 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 MMP24Q9Y5R2 645 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 MAD1L1Q9Y6D9 718 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 NOTCH3Q9UM47 2321 aa11.09□□□□□ -0.63
UBR4-210ENST00000466969 SACSQ9NZJ4 4579 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 A0A1B0GUS0 222 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms