RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 PRAMEF14Q5SWL7 426 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 PRAMEF13Q5VWM6 474 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 KHDRBS2Q5VWX1 349 aaKnown RBP12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 SLC27A4Q6P1M0 643 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 B3GLCTQ6Y288 498 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 CCDC28AQ8IWP9 274 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 SLC38A6Q8IZM9 456 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 ANKRD53Q8N9V6 530 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 SLC37A3Q8NCC5 494 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 VN1R2Q8NFZ6 395 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 NEIL3Q8TAT5 605 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 AKAP1Q92667 903 aaKnown RBP eCLIP12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 TEX10Q9NXF1 929 aaPredicted RBP12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 P2RX2Q9UBL9 471 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 A0A1W2PRU2 124 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 TSPAN11A1L157 253 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 CD8B2A6NJW9 211 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 LEUTXA8MZ59 168 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 GTPBP1O00178 669 aaKnown RBP12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 TMPRSS11DO60235 418 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 NR2F1P10589 423 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 CD8BP10966 210 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 CELP19835 753 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 POU3F3P20264 500 aaPredicted RBP12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 IFNA8P32881 189 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 UBE3AQ05086 875 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 ZNF57Q68EA5 555 aaPredicted RBP12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 TRMT11Q7Z4G4 463 aaKnown RBP12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 NR2C2APQ86WQ0 139 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 TRAPPC5Q8IUR0 188 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 CYB5D2Q8WUJ1 264 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 PPP1R16AQ96I34 528 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 MAP6Q96JE9 813 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 PRRC1Q96M27 445 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 SLC46A2Q9BY10 475 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 OR2AG1Q9H205 316 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 SLC28A3Q9HAS3 691 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 ATP13A2Q9NQ11 1180 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 PAK6Q9NQU5 681 aaPredicted RBP12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 AHSPQ9NZD4 102 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 TEKT2Q9UIF3 430 aa12.23□□□□□ -0.45
PDZRN3-205ENST00000466780 A0A087WUU8 490 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 K7ESM1 405 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 LANCL1O43813 399 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 NOS1APO75052 506 aaPredicted RBP12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 GAAP10253 952 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 ELK1P19419 428 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 MMP12P39900 470 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 ZNF791Q3KP31 576 aaPredicted RBP12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 EOGTQ5NDL2 527 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 CLEC12AQ5QGZ9 265 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 TMEM91Q6ZNR0 172 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 PRICKLE2Q7Z3G6 844 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 SZRD1Q7Z422 152 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 AMIGO1Q86WK6 493 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 LINC00471Q8N535 108 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 POGLUT1Q8NBL1 392 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 OR4M2Q8NGB6 313 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 TEX47Q8TBZ9 253 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 MS4A8Q9BY19 250 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 TRPC4Q9UBN4 977 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 PAHP00439 452 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 HLA-DPB1P04440 258 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 CHRM4P08173 479 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 ELFN1P0C7U0 828 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 TFPIP10646 304 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 GSTM3P21266 225 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 ACADLP28330 430 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 PTGER1P34995 402 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 INPP1P49441 399 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 MLLT1Q03111 559 aaPredicted RBP12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 FUT5Q11128 374 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 FZD5Q13467 585 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 DSG2Q14126 1118 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 GPR176Q14439 515 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 ESCO2Q56NI9 601 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 FAM205BPQ63HN1 556 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 WASH2PQ6VEQ5 465 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 AMER3Q8N944 861 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 CREB3L1Q96BA8 519 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 SLC35G5Q96KT7 338 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 ZDHHC5Q9C0B5 715 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 EPHX3Q9H6B9 360 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 CNIH4Q9P003 139 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 LIPT1Q9Y234 373 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 SLC9A8Q9Y2E8 581 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 COL4A3Q01955 1670 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 COL4A6Q14031 1691 aa12.22□□□□□ -0.45
PDZRN3-205ENST00000466780 MKI67P46013 3256 aaKnown RBP12.21□□□□□ -0.45
PDZRN3-205ENST00000466780 SNTNA6NMZ2 147 aa12.21□□□□□ -0.45
PDZRN3-205ENST00000466780 FABP7O15540 132 aa12.21□□□□□ -0.45
PDZRN3-205ENST00000466780 PI15O43692 258 aa12.21□□□□□ -0.45
PDZRN3-205ENST00000466780 AKAP8O43823 692 aaKnown RBP12.21□□□□□ -0.45
PDZRN3-205ENST00000466780 XPAP23025 273 aaPredicted RBP12.21□□□□□ -0.45
PDZRN3-205ENST00000466780 WEE1P30291 646 aa12.21□□□□□ -0.45
PDZRN3-205ENST00000466780 SLC6A1P30531 599 aa12.21□□□□□ -0.45
PDZRN3-205ENST00000466780 NUDT1P36639 197 aa12.21□□□□□ -0.45
PDZRN3-205ENST00000466780 CDH11P55287 796 aa12.21□□□□□ -0.45
PDZRN3-205ENST00000466780 CSTF1Q05048 431 aaKnown RBP12.21□□□□□ -0.45
PDZRN3-205ENST00000466780 MRPL28Q13084 256 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms