RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 KLHL6Q8WZ60 621 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 TRMT61AQ96FX7 289 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 TMEM80Q96HE8 168 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 SLX1AQ9BQ83 275 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 KLHL25Q9H0H3 589 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 TMEM168Q9H0V1 697 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 KLF15Q9UIH9 416 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 COLEC10Q9Y6Z7 277 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 A0A087WUU8 490 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 A0A0G2JPF8 293 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 CPSF4LA6NMK7 179 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 HNRNPCL2B2RXH8 293 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 HNRNPCL3B7ZW38 293 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 TBX1O43435 398 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 KCNJ13O60928 360 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 HNRNPCL4P0DMR1 293 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 MPIP34949 423 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 CD97P48960 835 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 MLLT1Q03111 559 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 ZNF311Q5JNZ3 666 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 PPP2R2DQ66LE6 453 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 C1orf94Q6P1W5 598 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 OR4N5Q8IXE1 308 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 ZCCHC10Q8TBK6 192 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 COL26A1Q96A83 441 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 C10orf90Q96M02 699 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 C1QTNF7Q9BXJ2 289 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 ANKHQ9HCJ1 492 aa17.55■□□□□ 0.4
TSPAN4-210ENST00000464987 KNL1Q8NG31 2342 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 P2RX6O15547 441 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 GUCY1B2O75343 617 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 APOL3O95236 402 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 PORP16435 677 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 MAGP20916 626 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 GTF2E2P29084 291 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 CSTF2P33240 577 aaKnown RBP eCLIP17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 TRHRP34981 398 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 GIPRP48546 466 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 PRR5P85299 388 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 MAP4K2Q12851 820 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 CEBPEQ15744 281 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 ATAT1Q5SQI0 421 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 FBXO42Q6P3S6 717 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 BHLHB9Q6PI77 547 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 PRICKLE2Q7Z3G6 844 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 LYSMD2Q8IV50 215 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 SPATA5L1Q9BVQ7 753 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 PINK1Q9BXM7 581 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 TMEM165Q9HC07 324 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 SEMA4GQ9NTN9 838 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 SNX7Q9UNH6 387 aa17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 CAB39Q9Y376 341 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-210ENST00000464987 TDRD6O60522 2096 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 PTNP21246 168 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 ACSL1P33121 698 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 MAGEA10P43363 369 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 PCYT1AP49585 367 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 SEPHS1P49903 392 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 PDX1P52945 283 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 STXBP1P61764 594 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 CADM3Q8N126 398 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 PARP16Q8N5Y8 322 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 OR7G2Q8NG99 324 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 FLVCR1-AS1Q8TAF5 88 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 SLC35A4Q96G79 324 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 BMFQ96LC9 184 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 MIR1-1HGQ9H1L0 117 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 OR6C2Q9NZP2 312 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 CNIH4Q9P003 139 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 CCDC59Q9P031 241 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 MYO15AQ9UKN7 3530 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 CTSVO60911 334 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 UPK1BO75841 260 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 SCG5P05408 212 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 ACTR1BP42025 376 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 TAS2R41P59536 307 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 ACTR1AP61163 376 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 CDK5Q00535 292 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 RHAGQ02094 409 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 ALDH6A1Q02252 535 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 NCF4Q15080 339 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 SPHARQ15513 63 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 SYT14P1Q58G82 188 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 NRROSQ86YC3 692 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 SLC16A11Q8NCK7 471 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 SRFBP1Q8NEF9 429 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 OR8D4Q8NGM9 314 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 FGF11Q92914 225 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 SIPA1Q96FS4 1042 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 LRR1Q96L50 414 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 CDCA3Q99618 268 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 KCNS3Q9BQ31 491 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 CNPPD1Q9BV87 410 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 EXOSC4Q9NPD3 245 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 GPR52Q9Y2T5 361 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 RPL36Q9Y3U8 105 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 ZNF780BQ9Y6R6 833 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 BRWD1Q9NSI6 2320 aa17.53■□□□□ 0.4
TSPAN4-210ENST00000464987 CASC3O15234 703 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-210ENST00000464987 NR2F6P10588 404 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms