RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CTRB1P17538 263 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 AHCYP23526 432 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 VIPR1P32241 457 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 CD70P32970 193 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 OR1D2P34982 312 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 BTCP35070 178 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 PTGS2P35354 604 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 IFNGR2P38484 337 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 CD79BP40259 229 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 FRKP42685 505 aaPredicted RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 PREPP48147 710 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 RAG2P55895 527 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 HSF2Q03933 536 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 CSTF1Q05048 431 aaKnown RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 PIN1Q13526 163 aaPredicted RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 LRRC32Q14392 662 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 EOGTQ5NDL2 527 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 BCL2L15Q5TBC7 163 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 HBMQ6B0K9 141 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 VASNQ6EMK4 673 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 CTRB2Q6GPI1 263 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 RASSF6Q6ZTQ3 369 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 C6orf120Q7Z4R8 191 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SLC9B2Q86UD5 537 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 CDH24Q86UP0 819 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 COMMD7Q86VX2 200 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 OR8H3Q8N146 312 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ZNF655Q8N720 491 aaPredicted RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 DNAJC5GQ8N7S2 189 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ZNF366Q8N895 744 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ZFP41Q8N8Y5 198 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 DBF4BQ8NFT6 615 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 OR11H7Q8NGC8 314 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 BBS10Q8TAM1 723 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SLC5A11Q8WWX8 675 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SMPDL3AQ92484 453 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 FOXJ1Q92949 421 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 GPA33Q99795 319 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 WFDC6Q9BQY6 131 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ZNF649Q9BS31 505 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 THAP7Q9BT49 309 aaPredicted RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 ZSCAN5AQ9BUG6 496 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 TMED9Q9BVK6 235 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ACAT2Q9BWD1 397 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 PLA2G12AQ9BZM1 189 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SAP130Q9H0E3 1048 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 KCNN2Q9H2S1 579 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 OR51J1Q9H342 316 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 DPAGT1Q9H3H5 408 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ERVMER34-1Q9H9K5 563 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SLAMF7Q9NQ25 335 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SIRT3Q9NTG7 399 aaPredicted RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 MED17Q9NVC6 651 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 AHSPQ9NZD4 102 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 COPZ2Q9P299 210 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 P2RX2Q9UBL9 471 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SH2B3Q9UQQ2 575 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 YIPF1Q9Y548 306 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ANAPC1Q9H1A4 1944 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 MEIKINA0A087WXM9 373 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 M0R3H8 397 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 GTPBP1O00178 669 aaKnown RBP6.87□□□□□ -1.31
USP48-206ENST00000464577 SLC28A2O43868 658 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 LZTS3O60299 673 aaPredicted RBP6.87□□□□□ -1.31
USP48-206ENST00000464577 C1orf105O95561 183 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 EFEMP2O95967 443 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 PAHP00439 452 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 BMP8BP34820 402 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 CLCNKAP51800 687 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 EPHA4P54764 986 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 MANFP55145 182 aaKnown RBP6.87□□□□□ -1.31
USP48-206ENST00000464577 CDH11P55287 796 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 POLR2LP62875 67 aaKnown RBP6.87□□□□□ -1.31
USP48-206ENST00000464577 TSPAN31Q12999 210 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 TAF1CQ15572 869 aaPredicted RBP6.87□□□□□ -1.31
USP48-206ENST00000464577 GRK1Q15835 563 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 TAF12Q16514 161 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 AANATQ16613 207 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 NTRK2Q16620 822 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 SPDYE7PQ495Y7 208 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 ZNF658BQ4V348 819 aaPredicted RBP6.87□□□□□ -1.31
USP48-206ENST00000464577 HENMT1Q5T8I9 393 aaKnown RBP6.87□□□□□ -1.31
USP48-206ENST00000464577 AADACL4Q5VUY2 407 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 TPGS2Q68CL5 300 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 RAET1GQ6H3X3 334 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 TMEM65Q6PI78 240 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 TMEM91Q6ZNR0 172 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 HSD11B1LQ7Z5J1 315 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 BMP8AQ7Z5Y6 402 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 TMEM150AQ86TG1 271 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 OAFQ86UD1 273 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 TMEM173Q86WV6 379 aaPredicted RBP6.87□□□□□ -1.31
USP48-206ENST00000464577 ADGRG3Q86Y34 549 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 TIGD4Q8IY51 512 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 MMP21Q8N119 569 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 RASGEF1AQ8N9B8 481 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 BCL7CQ8WUZ0 217 aaPredicted RBP6.87□□□□□ -1.31
USP48-206ENST00000464577 SLC9A6Q92581 669 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 RAB8BQ92930 207 aa6.87□□□□□ -1.31
USP48-206ENST00000464577 SCAMP4Q969E2 229 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms