RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 MAPRE3Q9UPY8 281 aa17.63■□□□□ 0.41
CCHCR1-210ENST00000464012 SLC6A5Q9Y345 797 aa17.63■□□□□ 0.41
CCHCR1-210ENST00000464012 FIS1Q9Y3D6 152 aa17.63■□□□□ 0.41
CCHCR1-210ENST00000464012 CREBBPQ92793 2442 aa17.63■□□□□ 0.41
CCHCR1-210ENST00000464012 APCP25054 2843 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 LRBAP50851 2863 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 REM1O75628 298 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 BCAS2O75934 225 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 NAGAP17050 411 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 DRD5P21918 477 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 ADH7P40394 386 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 CORO7P57737 925 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 NAA20P61599 178 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 DCAF7P61962 342 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 TFF3Q07654 80 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 CRYZQ08257 329 aaKnown RBP17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 EIPR1Q53HC9 387 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 WIPI1Q5MNZ9 446 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 LIPMQ5VYY2 423 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 NUP54Q7Z3B4 507 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 UBQLN3Q9H347 655 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 RRAGDQ9NQL2 400 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 PTGDR2Q9Y5Y4 395 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 ABCA12Q86UK0 2595 aa17.62■□□□□ 0.41
CCHCR1-210ENST00000464012 PRAMEF25A6NGN4 478 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 H3BQF6 201 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 ICOSLGO75144 302 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 ERN1O75460 977 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 JUNP05412 331 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 HPNP05981 417 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 DDCP20711 480 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 MSX1P28360 303 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 PTPN6P29350 595 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 PTGDSP41222 190 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 GSTM5P46439 218 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 NCBP2P52298 156 aaKnown RBP eCLIP17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 WNT3P56703 355 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 TLE4Q04727 773 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 ZNF155Q12901 538 aaPredicted RBP17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 PCLAFQ15004 111 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 PRSS53Q2L4Q9 553 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 TIGD3Q6B0B8 471 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 WDR53Q7Z5U6 358 aaPredicted RBP17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 C10orf107Q8IVU9 208 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 OR7G2Q8NG99 324 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 IQCGQ9H095 443 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 FOLH1BQ9HBA9 442 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 SIRT5Q9NXA8 310 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 MID2Q9UJV3 735 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 CAMK2AQ9UQM7 478 aa17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 GPR55Q9Y2T6 319 aaPredicted RBP17.61■□□□□ 0.41
CCHCR1-210ENST00000464012 KDM4EB2RXH2 506 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 RSL1D1O76021 490 aaKnown RBP17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 HOXD4P09016 255 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 UROSP10746 265 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 ELAVL4P26378 380 aaKnown RBP17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 IL12BP29460 328 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 MPIP34949 423 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 KRT20P35900 424 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 VSNL1P62760 191 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 SLC18A2Q05940 514 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 FAM71E1Q6IPT2 247 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 SLC30A6Q6NXT4 461 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 NPSR1Q6W5P4 371 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 TRIM46Q7Z4K8 759 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 YRDCQ86U90 279 aaKnown RBP17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 LIX1LQ8IVB5 337 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 ACBD4Q8NC06 268 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 FAM83FQ8NEG4 500 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 COL21A1Q96P44 957 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 BTBD9Q96Q07 612 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 ADOQ96SZ5 270 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 TIMP4Q99727 224 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 MYNNQ9NPC7 610 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 SERHLQ9NQF3 203 aa17.6■□□□□ 0.41
CCHCR1-210ENST00000464012 MYO9AB2RTY4 2548 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 MED12Q93074 2177 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 SNPHO15079 494 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 TO15178 435 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 SEC22BO75396 215 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 CT45A8P0DMV1 189 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 CT45A9P0DMV2 189 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 NTSP30990 170 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 MC3RP41968 323 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 KRTAP10-9P60411 292 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 CEBPEQ15744 281 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 ACSF3Q4G176 576 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 CT45A2Q5DJT8 189 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 SH2D4BQ5SQS7 431 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 DCST1Q5T197 706 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 RIPPLY2Q5TAB7 128 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 NOXRED1Q6NXP6 359 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 TMEM107Q6UX40 140 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 SLC44A2Q8IWA5 706 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 TMCO6Q96DC7 493 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 ERP27Q96DN0 273 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 C14orf79Q96F83 325 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 APOPT1Q96IL0 206 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 VSTM2LQ96N03 204 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms