RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 BTBD9Q96Q07 612 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 NODALQ96S42 347 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 OSBPL11Q9BXB4 747 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 UGT2B28Q9BY64 529 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 ACPTQ9BZG2 426 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 CALHM2Q9HA72 323 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 SIRT5Q9NXA8 310 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 EHD3Q9NZN3 535 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 EXO1Q9UQ84 846 aaKnown RBP13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 DLGAP4Q9Y2H0 992 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 GPR55Q9Y2T6 319 aaPredicted RBP13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 SLC6A5Q9Y345 797 aa13.11□□□□□ -0.31
SNRNP40-203ENST00000463988 GNG14A0A1W2PPG7 69 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 GNB5O14775 395 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 PCDH7O60245 1069 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 UGT2B11O75310 529 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 CTAG2O75638 210 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 CBR3O75828 277 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 IL3P08700 152 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 CD1EP15812 388 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 CHN1P15882 459 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 BMP5P22003 454 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 HMOX2P30519 316 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 GCKP35557 465 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 PTGDSP41222 190 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 KIR2DL3P43628 341 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 NAGLUP54802 743 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 RIPPLY3P57055 190 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 NAA20P61599 178 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 RAE1P78406 368 aaKnown RBP13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 ACSM2AQ08AH3 577 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 TOMM20Q15388 145 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 LTB4RQ15722 352 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 CEBPEQ15744 281 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 NNATQ16517 81 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 WIPI1Q5MNZ9 446 aaPredicted RBP13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 ACSM2BQ68CK6 577 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 POMZP3Q6PJE2 187 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 CCDC116Q8IYX3 515 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 RELL2Q8NC24 303 aaPredicted RBP13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 NAXEQ8NCW5 288 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 FAM83FQ8NEG4 500 aaPredicted RBP13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 ZPLD1Q8TCW7 415 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 RNASE6Q93091 150 aaKnown RBP13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 TMCO6Q96DC7 493 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 DTNBP1Q96EV8 351 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 SH3GL2Q99962 352 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 TXLNGYQ9BZA5 131 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 GIMAP4Q9NUV9 329 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 KLRF1Q9NZS2 232 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 PSMC3IPQ9P2W1 217 aaPredicted RBP13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 DCDC2Q9UHG0 476 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 CAMK2AQ9UQM7 478 aa13.1□□□□□ -0.31
SNRNP40-203ENST00000463988 FAM221AA4D161 298 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 MBD3L4A6NDZ8 208 aaPredicted RBP13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 MBD3L3A6NE82 208 aaPredicted RBP13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 PRAMEF25A6NGN4 478 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 MBD3L5A6NJ08 208 aaPredicted RBP13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 KDM4EB2RXH2 506 aaPredicted RBP13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 PLOD3O60568 738 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 IL18BPO95998 194 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 CT45A8P0DMV1 189 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 CT45A9P0DMV2 189 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 CPN1P15169 458 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 TIA1P31483 386 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 UQCRC1P31930 480 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 ZNF136P52737 540 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 MRPS35P82673 323 aaKnown RBP13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 ERCC6LQ2NKX8 1250 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 CT45A2Q5DJT8 189 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 FAM180BQ6P0A1 224 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 WDSUB1Q8N9V3 476 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 MBD3L2Q8NHZ7 208 aaPredicted RBP13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 C16orf78Q8WTQ4 265 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 FAM222BQ8WU58 562 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 CCDC126Q96EE4 140 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 SLC35A4Q96G79 324 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 APIPQ96GX9 242 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 VSTM2LQ96N03 204 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 COL21A1Q96P44 957 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 OR2B2Q9GZK3 357 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 STMN4Q9H169 189 aaPredicted RBP13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 GALNT9Q9HCQ5 603 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 PFDN4Q9NQP4 134 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 SLC35C2Q9NQQ7 365 aa13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 DNAJB12Q9NXW2 375 aaKnown RBP13.09□□□□□ -0.31
SNRNP40-203ENST00000463988 H3BQF6 201 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 SLITRK5O94991 958 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 PYGBP11216 843 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 CTSSP25774 331 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 DNAJA1P31689 397 aaKnown RBP13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 MPIP34949 423 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 OPRM1P35372 400 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 HTR6P50406 440 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 HMGCS1Q01581 520 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 EFR3AQ14156 821 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 RCAN2Q14206 197 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 SLC29A2Q14542 456 aa13.08□□□□□ -0.32
SNRNP40-203ENST00000463988 DCST1Q5T197 706 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms