RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 NCF2P19878 526 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-204ENST00000463487 SOX18P35713 384 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 CCT3P49368 545 aaKnown RBP18.28■□□□□ 0.52
COL9A3-204ENST00000463487 ARFIP2P53365 341 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 MRPS22P82650 360 aaKnown RBP18.28■□□□□ 0.52
COL9A3-204ENST00000463487 PLCXD2Q0VAA5 305 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 ZNF468Q5VIY5 522 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-204ENST00000463487 ZCCHC12Q6PEW1 402 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 MSANTD1Q6ZTZ1 278 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 CDRT4Q8N9R6 151 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 FAM13CQ8NE31 585 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 OR4A15Q8NGL6 344 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 TEX37Q96LM6 180 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 TMEM120AQ9BXJ8 343 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 Q9N2J8 555 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 EQTNQ9NQ60 294 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 KLHL1Q9NR64 748 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 LUZP4Q9P127 313 aa18.28■□□□□ 0.52
COL9A3-204ENST00000463487 GPR55Q9Y2T6 319 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-204ENST00000463487 FAM234BA2RU67 622 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 KLRC4-KLRK1H3BQV0 150 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 TO15178 435 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 NME2P1O60361 137 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 ABCB7O75027 752 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 C1QL1O75973 258 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 PSMG1O95456 288 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 NADKO95544 446 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-204ENST00000463487 P04436 131 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 NME2P22392 152 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 POLR2JP52435 117 aaKnown RBP18.27■□□□□ 0.52
COL9A3-204ENST00000463487 KCNK10P57789 538 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 HBA1P69905 142 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 NNATQ16517 81 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 FAM180AQ6UWF9 173 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 SLC44A2Q8IWA5 706 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-204ENST00000463487 Q8NA96 180 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 PSD4Q8NDX1 1056 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 SIMC1Q8NDZ2 872 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 FAM120BQ96EK7 910 aaKnown RBP18.27■□□□□ 0.52
COL9A3-204ENST00000463487 SCMH1Q96GD3 660 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 ZNF317Q96PQ6 595 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-204ENST00000463487 AGPAT4Q9NRZ5 378 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 KLHL14Q9P2G3 628 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 MAP10Q9P2G4 905 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 BTNL2Q9UIR0 455 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 FAF1Q9UNN5 650 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-204ENST00000463487 DTX4Q9Y2E6 619 aa18.27■□□□□ 0.52
COL9A3-204ENST00000463487 CHD6Q8TD26 2715 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 CRYABP02511 175 aaKnown RBP18.26■□□□□ 0.51
COL9A3-204ENST00000463487 ABCD3P28288 659 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 IL12BP29460 328 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 ST13P50502 369 aaKnown RBP18.26■□□□□ 0.51
COL9A3-204ENST00000463487 PSMD4P55036 377 aaKnown RBP18.26■□□□□ 0.51
COL9A3-204ENST00000463487 TP53BP2Q13625 1128 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 NTRK2Q16620 822 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 ZNF791Q3KP31 576 aaPredicted RBP18.26■□□□□ 0.51
COL9A3-204ENST00000463487 SLC22A10Q63ZE4 541 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 ANKRD46Q86W74 232 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 CLECL1Q8IZS7 167 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 SLC34A3Q8N130 599 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 NUDT8Q8WV74 236 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 JADE3Q92613 823 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 PANX1Q96RD7 426 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 LMF2Q9BU23 707 aaKnown RBP18.26■□□□□ 0.51
COL9A3-204ENST00000463487 CXorf36Q9H7Y0 433 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 SIRT3Q9NTG7 399 aaPredicted RBP18.26■□□□□ 0.51
COL9A3-204ENST00000463487 SACM1LQ9NTJ5 587 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 CNIH4Q9P003 139 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 PCDHGB3Q9Y5G1 929 aa18.26■□□□□ 0.51
COL9A3-204ENST00000463487 COPG1Q9Y678 874 aaKnown RBP18.26■□□□□ 0.51
COL9A3-204ENST00000463487 SLC28A2O43868 658 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 PPM1BO75688 479 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 KCNH1O95259 989 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 CPSF4O95639 269 aaKnown RBP18.25■□□□□ 0.51
COL9A3-204ENST00000463487 CT45A8P0DMV1 189 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 CT45A9P0DMV2 189 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 IL12AP29459 219 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 DGKQP52824 942 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 WNT3P56703 355 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 DECR1Q16698 335 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 CYP27C1Q4G0S4 372 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 CT45A2Q5DJT8 189 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 TBCELQ5QJ74 424 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 MFSD12Q6NUT3 480 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 PAOXQ6QHF9 649 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 GALNTL5Q7Z4T8 443 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 SLC9A6Q92581 669 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 OMA1Q96E52 524 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 CCDC115Q96NT0 180 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 SECISBP2Q96T21 854 aaKnown RBP18.25■□□□□ 0.51
COL9A3-204ENST00000463487 VPS4AQ9UN37 437 aa18.25■□□□□ 0.51
COL9A3-204ENST00000463487 RNF103-CHMP3A0A140T963 221 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 CCDC154A6NI56 674 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 C9JVG2 144 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 HS6ST1O60243 411 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 REM1O75628 298 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 ANP32DO95626 131 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 ALOX5P09917 674 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 UQCRC2P22695 453 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 LSP1P33241 339 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 305.9 ms