RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 OR2B2Q9GZK3 357 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 CDC42EP4Q9H3Q1 356 aaKnown RBP14.65□□□□□ -0.06
COL7A1-204ENST00000462475 GSX1Q9H4S2 264 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-204ENST00000462475 ZNF225Q9UK10 706 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 EDARQ9UNE0 448 aa14.65□□□□□ -0.06
COL7A1-204ENST00000462475 DNHD1Q96M86 4753 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 A8MT66 165 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 H0Y3Z8 333 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 OTCP00480 354 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 RAF1P04049 648 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 SBK3P0C264 359 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 CPN1P15169 458 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 ALDH9A1P49189 494 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 EMDP50402 254 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 ADAM8P78325 824 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 SRYQ05066 204 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 SNTA1Q13424 505 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 TSNAXIP1Q2TAA8 658 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 TCHHL1Q5QJ38 904 aaPredicted RBP14.64□□□□□ -0.07
COL7A1-204ENST00000462475 CAMKMTQ7Z624 323 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 C1orf52Q8N6N3 182 aaKnown RBP14.64□□□□□ -0.07
COL7A1-204ENST00000462475 OR14L1PQ8NHC6 308 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 ANP32BQ92688 251 aaKnown RBP14.64□□□□□ -0.07
COL7A1-204ENST00000462475 ZNF681Q96N22 645 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 G6PC3Q9BUM1 346 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 MRPL46Q9H2W6 279 aaKnown RBP14.64□□□□□ -0.07
COL7A1-204ENST00000462475 ANKRA2Q9H9E1 313 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 BRF2Q9HAW0 419 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 HEY2Q9UBP5 337 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 EXO1Q9UQ84 846 aaKnown RBP14.64□□□□□ -0.07
COL7A1-204ENST00000462475 NAV3Q8IVL0 2385 aa14.64□□□□□ -0.07
COL7A1-204ENST00000462475 FRG2CA6NGY1 282 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 CLCA1A8K7I4 914 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 TO15178 435 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 NME6O75414 186 aaPredicted RBP14.63□□□□□ -0.07
COL7A1-204ENST00000462475 DRD5P21918 477 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 GCKP35557 465 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 PPICP45877 212 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 DCAF7P61962 342 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 POU4F3Q15319 338 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 DEFB113Q30KQ7 82 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 ADGRE4PQ86SQ3 457 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 LUZP2Q86TE4 346 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 RELL1Q8IUW5 271 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 TRIM42Q8IWZ5 723 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 TMBIM1Q969X1 311 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 MRPL57Q9BQC6 102 aaKnown RBP14.63□□□□□ -0.07
COL7A1-204ENST00000462475 FAIM2Q9BWQ8 316 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 RBM24Q9BX46 236 aaKnown RBP14.63□□□□□ -0.07
COL7A1-204ENST00000462475 PLEKHF2Q9H8W4 249 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 GALNT8Q9NY28 637 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 PRODH2Q9UF12 536 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 TRPS1Q9UHF7 1281 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 FBXL2Q9UKC9 423 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 PSME2Q9UL46 239 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 SNX6Q9UNH7 406 aa14.63□□□□□ -0.07
COL7A1-204ENST00000462475 RPH3AQ9Y2J0 694 aaPredicted RBP14.63□□□□□ -0.07
COL7A1-204ENST00000462475 A0A1W2PPR1 153 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 TRIM49D1C9J1S8 452 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 ERN1O75460 977 aaKnown RBP14.62□□□□□ -0.07
COL7A1-204ENST00000462475 CBR3O75828 277 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 OR4F21O95013 312 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 HRGP04196 525 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 COL6A2P12110 1019 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 STARP49675 285 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 SERPINB9P50453 376 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 GFRA1P56159 465 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 HMGCS1Q01581 520 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 CKAP4Q07065 602 aaKnown RBP14.62□□□□□ -0.07
COL7A1-204ENST00000462475 KEAP1Q14145 624 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 ZNF628Q5EBL2 1059 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 ENPP6Q6UWR7 440 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 TAOK1Q7L7X3 1001 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 IFNEQ86WN2 208 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 GCNT2Q8N0V5 402 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 TMEM151AQ8N4L1 468 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 WFDC11Q8NEX6 87 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 DCAKDQ8WVC6 231 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 INTS12Q96CB8 462 aaKnown RBP14.62□□□□□ -0.07
COL7A1-204ENST00000462475 COL21A1Q96P44 957 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 YIPF4Q9BSR8 244 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 SFXN3Q9BWM7 321 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 C1QTNF3Q9BXJ4 246 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 PFDN4Q9NQP4 134 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 TAS2R10Q9NYW0 307 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 CLCF1Q9UBD9 225 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 UTS2RQ9UKP6 389 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 GPR55Q9Y2T6 319 aaPredicted RBP14.62□□□□□ -0.07
COL7A1-204ENST00000462475 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL7A1-204ENST00000462475 ZNF780BQ9Y6R6 833 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 DOCK7Q96N67 2140 aa14.62□□□□□ -0.07
COL7A1-204ENST00000462475 OR6C70A6NIJ9 312 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 B4DXG7 233 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 POC1B-GALNT4F8VUJ3 575 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 MANBAO00462 879 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 REM1O75628 298 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 RCBTB2O95199 551 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 ESRRBO95718 433 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 IL3P08700 152 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 CHN1P15882 459 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms