RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 ACTRT3Q9BYD9 372 aa12.52□□□□□ -0.41
PBRM1-219ENST00000462207 LIN28AQ9H9Z2 209 aaKnown RBP12.52□□□□□ -0.41
PBRM1-219ENST00000462207 BATF3Q9NR55 127 aa12.52□□□□□ -0.41
PBRM1-219ENST00000462207 COPS7AQ9UBW8 275 aa12.52□□□□□ -0.41
PBRM1-219ENST00000462207 PRPF19Q9UMS4 504 aaKnown RBP12.52□□□□□ -0.41
PBRM1-219ENST00000462207 FAF1Q9UNN5 650 aaPredicted RBP12.52□□□□□ -0.41
PBRM1-219ENST00000462207 NSG1A0A0A6YYJ2 146 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 TRBV11-1A0A0K0K1C0 115 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 CDC14CA4D256 554 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 HMGN4O00479 90 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 TNFRSF21O75509 655 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 PRKAR1AP10644 381 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 KHKP50053 298 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 EBPQ15125 230 aaKnown RBP12.51□□□□□ -0.41
PBRM1-219ENST00000462207 ADRM1Q16186 407 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 EXOSC6Q5RKV6 272 aaKnown RBP12.51□□□□□ -0.41
PBRM1-219ENST00000462207 CDC73Q6P1J9 531 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 PTOV1Q86YD1 416 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 RAB43Q86YS6 212 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 HPS6Q86YV9 775 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 ZZZ3Q8IYH5 903 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 GATA6Q92908 595 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 MCUR1Q96AQ8 359 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 GAL3ST4Q96RP7 486 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 SH3GL1Q99961 368 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 FAM117AQ9C073 453 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 SEMA4CQ9C0C4 833 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 ALG2Q9H553 416 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 CD300AQ9UGN4 299 aa12.51□□□□□ -0.41
PBRM1-219ENST00000462207 PPIEQ9UNP9 301 aaKnown RBP12.51□□□□□ -0.41
PBRM1-219ENST00000462207 MED19A0JLT2 244 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 PRAMEF27A3QJZ7 478 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 PCDH17O14917 1159 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 NKX2-8O15522 239 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 KLK10O43240 276 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 PRIM2P49643 509 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 EEFSECP57772 596 aaKnown RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 DSTNP60981 165 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 Q0VFX4 171 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 FUT5Q11128 374 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 FADDQ13158 208 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 SAMD4BQ5PRF9 694 aaKnown RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 GCNT6Q5T4J0 391 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 C16orf47Q6ZP98 133 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 NDUFAF7Q7L592 441 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 SLC44A2Q8IWA5 706 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 ULK2Q8IYT8 1036 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 LGI4Q8N135 537 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 ZSCAN1Q8NBB4 408 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 SNIP1Q8TAD8 396 aaKnown RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 MIPOL1Q8TD10 442 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 THAP3Q8WTV1 239 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 PIK3R3Q92569 461 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 CDS1Q92903 461 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 VMP1Q96GC9 406 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 CORO2BQ9UQ03 480 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 CEP295Q9C0D2 2601 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 GXYLT2A0PJZ3 443 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 BCAS2O75934 225 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 MAP3K8P41279 467 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 PSG6Q00889 435 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 PLAG1Q6DJT9 500 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 NET1Q7Z628 596 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 GALNT10Q86SR1 603 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 SERPINA11Q86U17 422 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 CDRT4Q8N9R6 151 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 ZNF248Q8NDW4 579 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 OR2T12Q8NG77 320 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 OR4N2Q8NGD1 307 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 ADAMTS15Q8TE58 950 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 XAGE5Q8WWM1 108 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 HOXB13Q92826 284 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 SLC35A4Q96G79 324 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 LMF1Q96S06 567 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 KCTD14Q9BQ13 255 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 LMF2Q9BU23 707 aaKnown RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 WWTR1Q9GZV5 400 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 RAD21L1Q9H4I0 556 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 CCDC86Q9H6F5 360 aaKnown RBP12.5□□□□□ -0.41
PBRM1-219ENST00000462207 ANGPTL2Q9UKU9 493 aa12.5□□□□□ -0.41
PBRM1-219ENST00000462207 FAM220BPB1ANY3 271 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 EFSO43281 561 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 ATP6V1G2O95670 118 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 HPP00738 406 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 ALOX5P09917 674 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 BMP2P12643 396 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 GABRA3P34903 492 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 RNF4P78317 190 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 MAPK11Q15759 364 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 CCNJQ5T5M9 372 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 PGM2L1Q6PCE3 622 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 HSDL2Q6YN16 418 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 ANKFN1Q8N957 763 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 ADIPOR1Q96A54 375 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 PCDHAC1Q9H158 963 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 NXF5Q9H1B4 397 aaKnown RBP12.49□□□□□ -0.41
PBRM1-219ENST00000462207 PRODH2Q9UF12 536 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 EGFL7Q9UHF1 273 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 SLC7A8Q9UHI5 535 aa12.49□□□□□ -0.41
PBRM1-219ENST00000462207 NCOR2Q9Y618 2525 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms