RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 SNX31Q8N9S9 440 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 TOR1AIP2Q8NFQ8 470 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 OR52B6Q8NGF0 335 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 SNRNP27Q8WVK2 155 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 N4BP2L2Q92802 583 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 PRR25Q96S07 402 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 ALG8Q9BVK2 526 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 C1QTNF3Q9BXJ4 246 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 EHD1Q9H4M9 534 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 KLHL31Q9H511 634 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 PRORYQ9H606 182 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 CCDC134Q9H6E4 229 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 CNOT10Q9H9A5 744 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 LIN7CQ9NUP9 197 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 PCTPQ9UKL6 214 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 AP1M2Q9Y6Q5 423 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 CACNA1BQ00975 2339 aa7.52□□□□□ -1.2
ECHDC1-212ENST00000461239 KALRNO60229 2985 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 A0A1B0GX78 115 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 PSMD9O00233 223 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 DSCR3O14972 297 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 TYROBPO43914 113 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 SMIM10L1P0DMW3 83 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 H2AFXP16104 143 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 TSPAN8P19075 237 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 PCSK6P29122 969 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 HNRNPH1P31943 449 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 AHRP35869 848 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 DLSTP36957 453 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 CCR10P46092 362 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 DGKQP52824 942 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 ARSFP54793 590 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 CDH13P55290 713 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 IFFO1Q0D2I5 559 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 TRAF3Q13114 568 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 CHIT1Q13231 466 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 DNASE1L3Q13609 305 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 GTF2H2Q13888 395 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 SYT16Q17RD7 645 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 COL28A1Q2UY09 1125 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 GLIPR1L2Q4G1C9 344 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 NKAIN1Q4KMZ8 207 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 TIGD2Q4W5G0 525 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 XKR6Q5GH73 641 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 SPDYAQ5MJ70 313 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 MANEAQ5SRI9 462 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 ZNF678Q5SXM1 525 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 KRTAP5-3Q6L8H2 238 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 GTF2H2CQ6P1K8 395 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 C1orf122Q6ZSJ8 110 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 ASPGQ86U10 573 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 EXOC3L1Q86VI1 746 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 SRRM1Q8IYB3 904 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 ENDOVQ8N8Q3 282 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 AMER3Q8N944 861 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 PCYOX1LQ8NBM8 494 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 NT5CQ8TCD5 201 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 PROKR1Q8TCW9 393 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 SLC13A3Q8WWT9 602 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 NPIPB3Q92617 1050 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 MR1Q95460 341 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 RFKQ969G6 155 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 SMIM10Q96HG1 83 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 SLC45A3Q96JT2 553 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 TMEM237Q96Q45 408 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 AIF1LQ9BQI0 150 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 NT5DC2Q9H857 520 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 NOL11Q9H8H0 719 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 IRAK4Q9NWZ3 460 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 EHD3Q9NZN3 535 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 SLC17A7Q9P2U7 560 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 OPTCQ9UBM4 332 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 DCDC2Q9UHG0 476 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 PLLPQ9Y342 182 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 UBE2J1Q9Y385 318 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 MAU2Q9Y6X3 613 aa7.52□□□□□ -1.21
ECHDC1-212ENST00000461239 A0A0A6YYC8 382 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 VSTM2BA6NLU5 285 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 C21orf140B9A014 251 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 I3L1I5 382 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 UBFD1O14562 309 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 COPEO14579 308 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 CLGNO14967 610 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 GLRA3O75311 464 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 SPAG7O75391 227 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 KLK3P07288 261 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 UMODP07911 640 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 HBQ1P09105 142 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 RAB40ALP0C0E4 278 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 ITGAMP11215 1152 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 IL1RNP18510 177 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 IMPDH1P20839 514 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 ATP5F1P24539 256 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 PTPN4P29074 926 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 THBS4P35443 961 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 NR1H2P55055 460 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 DCDP81605 110 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 MAT1AQ00266 395 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 IRF8Q02556 426 aa7.51□□□□□ -1.21
ECHDC1-212ENST00000461239 PLP2Q04941 152 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms