RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SCAMP2O15127 329 aaKnown RBP12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 OR6B1O95007 311 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 TGDSO95455 350 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 CBX7O95931 251 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 CLPSP04118 112 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 IFI6P09912 130 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 SOX3P41225 446 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 PPICP45877 212 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 TMED10P49755 219 aaKnown RBP12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 MRPS35P82673 323 aaKnown RBP12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 PTGR1Q14914 329 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 EXOSC7Q15024 291 aaKnown RBP12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 C3AR1Q16581 482 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 PRSS53Q2L4Q9 553 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 LSM12Q3MHD2 195 aaKnown RBP12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 NXNQ6DKJ4 435 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 OGFOD2Q6N063 350 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 ANKRD26P1Q6NSI1 321 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 C16orf47Q6ZP98 133 aaPredicted RBP12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 Q6ZPB1 254 aaPredicted RBP12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 RTL4Q6ZR62 310 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 RGS9BPQ6ZS82 235 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 GOLM1Q8NBJ4 401 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 CEP70Q8NHQ1 597 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 ITLN2Q8WWU7 325 aaPredicted RBP12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 ADIPOR1Q96A54 375 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 MARVELD3Q96A59 401 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 HSPBAP1Q96EW2 488 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 LCORQ96JN0 433 aaPredicted RBP12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 DPY30Q9C005 99 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 C3orf14Q9HBI5 128 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 TINAGQ9UJW2 476 aa12.21□□□□□ -0.45
RAB11FIP3-207ENST00000461009 NUP214P35658 2090 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 TTC36A6NLP5 189 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 TP53I11O14683 189 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ACOX3O15254 700 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CDC40O60508 579 aaKnown RBP eCLIP12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 P04436 131 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 NAGAP17050 411 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 DRD5P21918 477 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 HTR1EP28566 365 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 EPHA3P29320 983 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PTGER1P34995 402 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 EMDP50402 254 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 C21orf58P58505 322 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PSPHP78330 225 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 RPP38P78345 283 aaKnown RBP12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PLGLB1Q02325 96 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 HSPB3Q12988 150 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 RPS6KA2Q15349 733 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 SIAH3Q8IW03 269 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ZNF441Q8N8Z8 693 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 VPS37AQ8NEZ2 397 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 OR7A2PQ8NGA2 310 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ACTRT2Q8TDY3 377 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 COQ8BQ96D53 544 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 SPACA9Q96E40 222 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ELP4Q96EB1 424 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 DDX18Q9NVP1 670 aaKnown RBP12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 C19orf53Q9UNZ5 99 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 MEMO1Q9Y316 297 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 NPFFR2Q9Y5X5 522 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 USH1CQ9Y6N9 552 aa12.2□□□□□ -0.46
RAB11FIP3-207ENST00000461009 EML6Q6ZMW3 1958 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 MYO7BQ6PIF6 2116 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 GOLGA8QA0A0J9YX86 632 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 A0A1W2PRB8 838 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 GOLGA8OA6NCC3 632 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ENO4A6NNW6 628 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 GOLGA8NF8WBI6 632 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 DIAPH2O60879 1101 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 NADKO95544 446 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 FBXO45P0C2W1 286 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 LAMP1P11279 417 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 GPX3P22352 226 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PTGS2P35354 604 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 MC3RP41968 323 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 FRKP42685 505 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CLNS1AP54105 237 aaKnown RBP12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 DIO3P55073 304 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 MLC1Q15049 377 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ZNHIT3Q15649 155 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 DPY19L1Q2PZI1 675 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PGS1Q32NB8 556 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ZNF791Q3KP31 576 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ZNF385BQ569K4 471 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 SLC22A10Q63ZE4 541 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 TMEM211Q6ICI0 200 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ARHGAP11AQ6P4F7 1023 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 TMEM107Q6UX40 140 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 GK5Q6ZS86 529 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ACAD11Q709F0 780 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ZNF551Q7Z340 670 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 SLC22A16Q86VW1 577 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ZNF227Q86WZ6 799 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 RIMKLAQ8IXN7 391 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ZFP62Q8NB50 900 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PSD4Q8NDX1 1056 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 OR7G2Q8NG99 324 aa12.19□□□□□ -0.46
RAB11FIP3-207ENST00000461009 OR5P2Q8WZ92 322 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms