RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 ENTPD4Q9Y227 616 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 B3GNT3Q9Y2A9 372 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 TRBV11-1A0A0K0K1C0 115 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 ATP6AP2A0A1C7CYW4 349 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 TRPC5OSA6NMA1 111 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 HDAC3O15379 428 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 ATP6AP2O75787 350 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 DDAH2O95865 285 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 PDGFAP04085 211 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 ATP1B1P05026 303 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 JUNP05412 331 aaKnown RBP10.31□□□□□ -0.76
APTX-209ENST00000460940 C2orf80Q0P641 193 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 MEP1AQ16819 746 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 C6orf136Q5SQH8 315 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 ABHD17BQ5VST6 288 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 CRLF3Q8IUI8 442 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 GALNT12Q8IXK2 581 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 MMP21Q8N119 569 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 ARMC10Q8N2F6 343 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 CENPSQ8N2Z9 138 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 LRRC25Q8N386 305 aaPredicted RBP10.31□□□□□ -0.76
APTX-209ENST00000460940 ZADH2Q8N4Q0 377 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 FNDC5Q8NAU1 212 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 OR8K3Q8NH51 312 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 CDC26Q8NHZ8 85 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 DEFB126Q9BYW3 111 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 RYDENQ9NUL5 291 aaKnown RBP10.31□□□□□ -0.76
APTX-209ENST00000460940 PNPOQ9NVS9 261 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 TAS2R7Q9NYW3 318 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 PTGFRNQ9P2B2 879 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 POMPQ9Y244 141 aa10.31□□□□□ -0.76
APTX-209ENST00000460940 SMG1Q96Q15 3661 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 WASHC1A8K0Z3 465 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 TBX19O60806 448 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 ERAL1O75616 437 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 IGKV3-11P04433 115 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 PRPS2P11908 318 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 BCKDHAP12694 445 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 PCSK2P16519 638 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 TACR1P25103 407 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 HPCAL1P37235 193 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 RPL3P39023 403 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 EMX2Q04743 252 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 KLRB1Q12918 225 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 CEBPEQ15744 281 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 HSDL2Q6YN16 418 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 FAM9CQ8IZT9 166 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 ANKK1Q8NFD2 765 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 PIWIL2Q8TC59 973 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 UCN3Q969E3 161 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 MTERF3Q96E29 417 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 CNRIP1Q96F85 164 aaPredicted RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 PLEKHA8Q96JA3 519 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 CNBD2Q96M20 576 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 ZNF681Q96N22 645 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 OR8D2Q9GZM6 311 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 CXorf21Q9HAI6 301 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 SLC35C2Q9NQQ7 365 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 EIF3LQ9Y262 564 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 SCN2AQ99250 2005 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 DOCK10Q96BY6 2186 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 MYOCOSA0A1B0GUC4 107 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 DYTNA2CJ06 578 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 TRIM64CA6NLI5 447 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 OR6C76A6NM76 312 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 K7EM74 188 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 SULT1C4O75897 302 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 ZFAND5O76080 213 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 SLITRK5O94991 958 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 INHBBP09529 407 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 NTSP30990 170 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 EIF2B2P49770 351 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 ERVK-8P63133 956 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 TXNL4AP83876 142 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 ACER2Q5QJU3 275 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 LINC00696Q6ZRV3 163 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 R3HCC1LQ7Z5L2 792 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 AMIGO2Q86SJ2 522 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 RPS19BP1Q86WX3 136 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 CHERPQ8IWX8 916 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 FBXW8Q8N3Y1 598 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 POU5F2Q8N7G0 328 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 OR5L2Q8NGL0 311 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 ZNF675Q8TD23 568 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 ZNF721Q8TF20 911 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 EXOSC8Q96B26 276 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 PPWD1Q96BP3 646 aaKnown RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 SENP5Q96HI0 755 aaPredicted RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 TSSK3Q96PN8 268 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 CNPPD1Q9BV87 410 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 REEP4Q9H6H4 257 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 AKTIPQ9H8T0 292 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 ATAD3AQ9NVI7 634 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 MARCOQ9UEW3 520 aaPredicted RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 GIMAP2Q9UG22 337 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 BCAP29Q9UHQ4 241 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 ANAPC2Q9UJX6 822 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 ZNF223Q9UK11 482 aaPredicted RBP10.3□□□□□ -0.76
APTX-209ENST00000460940 MAPRE3Q9UPY8 281 aa10.3□□□□□ -0.76
APTX-209ENST00000460940 FAM47E-STBD1D6RA91 191 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms