RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 C6orf203Q9P0P8 240 aaPredicted RBP2.58□□□□□ -2
HPS3-203ENST00000460822 KLHDC2Q9Y2U9 406 aa2.58□□□□□ -2
HPS3-203ENST00000460822 ZNF175Q9Y473 711 aa2.58□□□□□ -2
HPS3-203ENST00000460822 RNF115Q9Y4L5 304 aa2.58□□□□□ -2
HPS3-203ENST00000460822 PCDHGB1Q9Y5G3 927 aa2.58□□□□□ -2
HPS3-203ENST00000460822 TET3O43151 1660 aa2.57□□□□□ -2
HPS3-203ENST00000460822 KIF16BQ96L93 1317 aa2.57□□□□□ -2
HPS3-203ENST00000460822 DLG5Q8TDM6 1919 aa2.57□□□□□ -2
HPS3-203ENST00000460822 hCG_38984A0A1B0GV85 526 aa2.57□□□□□ -2
HPS3-203ENST00000460822 MBLAC1A4D2B0 266 aaPredicted RBP2.57□□□□□ -2
HPS3-203ENST00000460822 ERICH4A6NGS2 130 aa2.57□□□□□ -2
HPS3-203ENST00000460822 LRRIQ4A6NIV6 560 aa2.57□□□□□ -2
HPS3-203ENST00000460822 FAM25EA8MYX2 175 aa2.57□□□□□ -2
HPS3-203ENST00000460822 MED7O43513 233 aa2.57□□□□□ -2
HPS3-203ENST00000460822 KIAA0513O60268 411 aa2.57□□□□□ -2
HPS3-203ENST00000460822 TRMUO75648 421 aaKnown RBP2.57□□□□□ -2
HPS3-203ENST00000460822 RHBDL1O75783 438 aa2.57□□□□□ -2
HPS3-203ENST00000460822 TM7SF2O76062 418 aa2.57□□□□□ -2
HPS3-203ENST00000460822 NADKO95544 446 aaPredicted RBP2.57□□□□□ -2
HPS3-203ENST00000460822 CLPTM1O96005 669 aa2.57□□□□□ -2
HPS3-203ENST00000460822 HPRP00739 348 aa2.57□□□□□ -2
HPS3-203ENST00000460822 MT-ND1P03886 318 aa2.57□□□□□ -2
HPS3-203ENST00000460822 UQCRFS1P1P0C7P4 283 aa2.57□□□□□ -2
HPS3-203ENST00000460822 FAM157CP0CG43 387 aa2.57□□□□□ -2
HPS3-203ENST00000460822 GP9P14770 177 aa2.57□□□□□ -2
HPS3-203ENST00000460822 AMD1P17707 334 aa2.57□□□□□ -2
HPS3-203ENST00000460822 TSPAN8P19075 237 aa2.57□□□□□ -2
HPS3-203ENST00000460822 GALP22466 123 aa2.57□□□□□ -2
HPS3-203ENST00000460822 TRIM23P36406 574 aa2.57□□□□□ -2
HPS3-203ENST00000460822 NAPAP54920 295 aa2.57□□□□□ -2
HPS3-203ENST00000460822 XGP55808 180 aa2.57□□□□□ -2
HPS3-203ENST00000460822 SH3BGRP55822 239 aaPredicted RBP2.57□□□□□ -2
HPS3-203ENST00000460822 RPS4XP62701 263 aaKnown RBP2.57□□□□□ -2
HPS3-203ENST00000460822 CSNK2BP67870 215 aa2.57□□□□□ -2
HPS3-203ENST00000460822 ILF3Q12906 894 aaKnown RBP eCLIP2.57□□□□□ -2
HPS3-203ENST00000460822 PLD1Q13393 1074 aa2.57□□□□□ -2
HPS3-203ENST00000460822 TMED1Q13445 227 aa2.57□□□□□ -2
HPS3-203ENST00000460822 ZSWIM7Q19AV6 140 aa2.57□□□□□ -2
HPS3-203ENST00000460822 LRIT3Q3SXY7 679 aa2.57□□□□□ -2
HPS3-203ENST00000460822 HSP90AB3PQ58FF7 597 aa2.57□□□□□ -2
HPS3-203ENST00000460822 ZNF311Q5JNZ3 666 aa2.57□□□□□ -2
HPS3-203ENST00000460822 TTC23Q5W5X9 447 aa2.57□□□□□ -2
HPS3-203ENST00000460822 METAP1DQ6UB28 335 aaPredicted RBP2.57□□□□□ -2
HPS3-203ENST00000460822 CWC27Q6UX04 472 aaKnown RBP2.57□□□□□ -2
HPS3-203ENST00000460822 ZNF730Q6ZMV8 503 aa2.57□□□□□ -2
HPS3-203ENST00000460822 EFL1Q7Z2Z2 1120 aaKnown RBP2.57□□□□□ -2
HPS3-203ENST00000460822 LHFPL4Q7Z7J7 247 aa2.57□□□□□ -2
HPS3-203ENST00000460822 RBM23Q86U06 439 aaKnown RBP2.57□□□□□ -2
HPS3-203ENST00000460822 OR6C4Q8NGE1 309 aa2.57□□□□□ -2
HPS3-203ENST00000460822 PNPT1Q8TCS8 783 aaKnown RBP2.57□□□□□ -2
HPS3-203ENST00000460822 SUSD6Q92537 303 aa2.57□□□□□ -2
HPS3-203ENST00000460822 PINX1Q96BK5 328 aaKnown RBP2.57□□□□□ -2
HPS3-203ENST00000460822 INPP4AQ96PE3 977 aaPredicted RBP2.57□□□□□ -2
HPS3-203ENST00000460822 CRNKL1Q9BZJ0 848 aaKnown RBP2.57□□□□□ -2
HPS3-203ENST00000460822 GPR61Q9BZJ8 451 aa2.57□□□□□ -2
HPS3-203ENST00000460822 LRRCC1Q9C099 1032 aa2.57□□□□□ -2
HPS3-203ENST00000460822 METTL7AQ9H8H3 244 aa2.57□□□□□ -2
HPS3-203ENST00000460822 SLC25A19Q9HC21 320 aa2.57□□□□□ -2
HPS3-203ENST00000460822 TXLNGQ9NUQ3 528 aa2.57□□□□□ -2
HPS3-203ENST00000460822 DDX19BQ9UMR2 479 aa2.57□□□□□ -2
HPS3-203ENST00000460822 SLC6A5Q9Y345 797 aa2.57□□□□□ -2
HPS3-203ENST00000460822 ABCC11Q96J66 1382 aa2.57□□□□□ -2
HPS3-203ENST00000460822 UHRF1BP1LA0JNW5 1464 aa2.57□□□□□ -2
HPS3-203ENST00000460822 ATP10BO94823 1461 aa2.57□□□□□ -2
HPS3-203ENST00000460822 ERCC6Q03468 1493 aa2.57□□□□□ -2
HPS3-203ENST00000460822 SPATA31D1Q6ZQQ2 1576 aa2.57□□□□□ -2
HPS3-203ENST00000460822 WDR19Q8NEZ3 1342 aa2.57□□□□□ -2
HPS3-203ENST00000460822 STK36Q9NRP7 1315 aa2.57□□□□□ -2
HPS3-203ENST00000460822 NSD3Q9BZ95 1437 aa2.56□□□□□ -2
HPS3-203ENST00000460822 TRIP12Q14669 1992 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 A0A1W2PR80 420 aa2.56□□□□□ -2
HPS3-203ENST00000460822 GOLGA8OA6NCC3 632 aa2.56□□□□□ -2
HPS3-203ENST00000460822 NKX6-3A6NJ46 265 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ZNF716A6NP11 495 aa2.56□□□□□ -2
HPS3-203ENST00000460822 A8MU76 341 aa2.56□□□□□ -2
HPS3-203ENST00000460822 TCP10L2B9ZVM9 353 aa2.56□□□□□ -2
HPS3-203ENST00000460822 GOLGA8NF8WBI6 632 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ZNF195O14628 629 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ZNF208O43345 1280 aa2.56□□□□□ -2
HPS3-203ENST00000460822 SDC3O75056 442 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ECI2O75521 394 aa2.56□□□□□ -2
HPS3-203ENST00000460822 NDUFA7O95182 113 aa2.56□□□□□ -2
HPS3-203ENST00000460822 FGF19O95750 216 aa2.56□□□□□ -2
HPS3-203ENST00000460822 CAVIN2O95810 425 aa2.56□□□□□ -2
HPS3-203ENST00000460822 CRYAAP02489 173 aa2.56□□□□□ -2
HPS3-203ENST00000460822 CSF2P04141 144 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ZNF735P0CB33 412 aa2.56□□□□□ -2
HPS3-203ENST00000460822 MBL2P11226 248 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 PAX1P15863 534 aa2.56□□□□□ -2
HPS3-203ENST00000460822 C4BPBP20851 252 aa2.56□□□□□ -2
HPS3-203ENST00000460822 GIFP27352 417 aa2.56□□□□□ -2
HPS3-203ENST00000460822 AXLP30530 894 aa2.56□□□□□ -2
HPS3-203ENST00000460822 FHITP49789 147 aa2.56□□□□□ -2
HPS3-203ENST00000460822 PRRX1P54821 245 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ATP5IP56385 69 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 NAAAQ02083 359 aa2.56□□□□□ -2
HPS3-203ENST00000460822 SELPLGQ14242 412 aa2.56□□□□□ -2
HPS3-203ENST00000460822 PHYHD1Q5SRE7 291 aa2.56□□□□□ -2
HPS3-203ENST00000460822 BLOC1S2Q6QNY1 142 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ASRGL1Q7L266 308 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms