RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CPQQ9Y646 472 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 STYXL1Q9Y6J8 313 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 TMEM94Q12767 1356 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 COL5A2P05997 1499 aaPredicted RBP2.68□□□□□ -1.98
RFC4-211ENST00000460408 SCAF11Q99590 1463 aaKnown RBP2.68□□□□□ -1.98
RFC4-211ENST00000460408 ABCC3O15438 1527 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 ABCC1P33527 1531 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.68□□□□□ -1.98
RFC4-211ENST00000460408 KRT87PA6NCN2 255 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 BUB1O43683 1085 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 PRPSAP2O60256 369 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 STK17BO94768 372 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 VENTXO95231 258 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 MT-ATP6P00846 226 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 PROS1P07225 676 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 FCGR3AP08637 254 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 CCDC192P0DO97 292 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 FOLR2P14207 255 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 CYP11B1P15538 503 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 GATA1P15976 413 aaPredicted RBP2.67□□□□□ -1.98
RFC4-211ENST00000460408 CAPN2P17655 700 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 AZU1P20160 251 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 CCNA2P20248 432 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 GATA2P23769 480 aaPredicted RBP2.67□□□□□ -1.98
RFC4-211ENST00000460408 UCP1P25874 307 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 RPA1P27694 616 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 MAGEA4P43358 317 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 PGFP49763 221 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 SGSHP51688 502 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 NAAAQ02083 359 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 CYLC2Q14093 348 aaPredicted RBP2.67□□□□□ -1.98
RFC4-211ENST00000460408 PDIA5Q14554 519 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 SHROOM1Q2M3G4 852 aaPredicted RBP2.67□□□□□ -1.98
RFC4-211ENST00000460408 LRIT3Q3SXY7 679 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 CCDC40Q4G0X9 1142 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 TCTEX1D4Q5JR98 221 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 ZNF506Q5JVG8 444 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 TCHHL1Q5QJ38 904 aaPredicted RBP2.67□□□□□ -1.98
RFC4-211ENST00000460408 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 LEMD1Q68G75 181 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 ARMCX5Q6P1M9 558 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 ZCCHC12Q6PEW1 402 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 REG3GQ6UW15 175 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 ATRAIDQ6UW56 229 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 DPY19L2P2Q6ZN68 376 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 TMUB2Q71RG4 321 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 LRRC49Q8IUZ0 686 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 RNF148Q8N7C7 305 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 MINDY2Q8NBR6 621 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 CNNM3Q8NE01 707 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 FAM222BQ8WU58 562 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 U2AF1L4Q8WU68 220 aaKnown RBP2.67□□□□□ -1.98
RFC4-211ENST00000460408 PHYHIPQ92561 330 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 BIRC7Q96CA5 298 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 C14orf79Q96F83 325 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 C1orf147Q96MC9 270 aaPredicted RBP2.67□□□□□ -1.98
RFC4-211ENST00000460408 FAM111AQ96PZ2 611 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 TTYH2Q9BSA4 534 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 GPR174Q9BXC1 333 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 RAB11FIP5Q9BXF6 653 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 ATG10Q9H0Y0 220 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 C1orf21Q9H246 121 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 NRN1Q9NPD7 142 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.67□□□□□ -1.98
RFC4-211ENST00000460408 MLXQ9UH92 298 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 CIDEBQ9UHD4 219 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 IKZF3Q9UKT9 509 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 ODF2LQ9ULJ1 636 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 MRPL11Q9Y3B7 192 aaKnown RBP2.67□□□□□ -1.98
RFC4-211ENST00000460408 KLF2Q9Y5W3 355 aaPredicted RBP2.67□□□□□ -1.98
RFC4-211ENST00000460408 SMAD5-AS1Q9Y6J3 95 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 TDRD15B5MCY1 1934 aaKnown RBP2.67□□□□□ -1.98
RFC4-211ENST00000460408 NOTCH2Q04721 2471 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 ATP7AQ04656 1500 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 FER1L5A0AVI2 2057 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 TNS2Q63HR2 1409 aa2.67□□□□□ -1.98
RFC4-211ENST00000460408 ITSN2Q9NZM3 1697 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 UGGT1Q9NYU2 1555 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 ARHGAP23Q9P227 1491 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 UTRNP46939 3433 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 TNRQ92752 1358 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 CYB561D2O14569 222 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 SSX5O60225 188 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 GALR3O60755 368 aaPredicted RBP2.66□□□□□ -1.98
RFC4-211ENST00000460408 GP9P14770 177 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 BCL3P20749 454 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 TMOD1P28289 359 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 PRDX2P32119 198 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 NUMBP49757 651 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 LMO4P61968 165 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 MYBPC1Q00872 1141 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 COX10Q12887 443 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 NME3Q13232 169 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 SNX1Q13596 522 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 CD226Q15762 336 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 CARTPTQ16568 116 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 TMEM44Q2T9K0 475 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 ACSF3Q4G176 576 aaPredicted RBP2.66□□□□□ -1.98
RFC4-211ENST00000460408 NHLRC3Q5JS37 347 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 TOR1AIP1Q5JTV8 583 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms