RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 MASP1P48740 699 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 PRSS53Q2L4Q9 553 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 RFTN2Q52LD8 501 aaPredicted RBP21.08■□□□□ 0.97
PTPN4-208ENST00000460289 ZNF787Q6DD87 383 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 TMEM81Q6P7N7 255 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 NUDCD3Q8IVD9 361 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 OR7G2Q8NG99 324 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 EGLN2Q96KS0 407 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 FCRL1Q96LA6 429 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 CENPHQ9H3R5 247 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 METTL7AQ9H8H3 244 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 CHST11Q9NPF2 352 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 COQ3Q9NZJ6 369 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 ACAD8Q9UKU7 415 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 HRH3Q9Y5N1 445 aa21.08■□□□□ 0.97
PTPN4-208ENST00000460289 MAST4O15021 2626 aa21.08■□□□□ 0.96
PTPN4-208ENST00000460289 ZNF407Q9C0G0 2248 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 TMEM233B4DJY2 109 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 PLOD2O00469 737 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 COQ9O75208 318 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 ERN1O75460 977 aaKnown RBP21.07■□□□□ 0.96
PTPN4-208ENST00000460289 RPL38P63173 70 aaKnown RBP21.07■□□□□ 0.96
PTPN4-208ENST00000460289 SNTA1Q13424 505 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 EMC4Q5J8M3 183 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 CEP85LQ5SZL2 805 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 BICRALQ6AI39 1079 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 SLC30A6Q6NXT4 461 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 EXOC3L1Q86VI1 746 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 OR6Y1Q8NGX8 325 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 PPP1R14CQ8TAE6 165 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 HGDQ93099 445 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 TMCO6Q96DC7 493 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 ZNF764Q96H86 408 aaPredicted RBP21.07■□□□□ 0.96
PTPN4-208ENST00000460289 TMEM41AQ96HV5 264 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 VSTM2LQ96N03 204 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 GLIPR2Q9H4G4 154 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 FOLH1BQ9HBA9 442 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 UNC79Q9P2D8 2635 aa21.07■□□□□ 0.96
PTPN4-208ENST00000460289 NAV2Q8IVL1 2488 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 OR6C70A6NIJ9 312 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 FIGNL2A6NMB9 653 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 PIP5K1BO14986 540 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 ABCB7O75027 752 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 REM1O75628 298 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 CLDN14O95500 239 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 CT45A8P0DMV1 189 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 CT45A9P0DMV2 189 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 SDC1P18827 310 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 ELAVL4P26378 380 aaKnown RBP21.06■□□□□ 0.96
PTPN4-208ENST00000460289 GDF1P27539 372 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 HTR1EP28566 365 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 KRT20P35900 424 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 SERPINB4P48594 390 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 ZNF630Q2M218 657 aaPredicted RBP21.06■□□□□ 0.96
PTPN4-208ENST00000460289 GALNTL6Q49A17 601 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 CT45A2Q5DJT8 189 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 WLSQ5T9L3 541 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 LIX1Q8N485 282 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 AGR3Q8TD06 166 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 GFM2Q969S9 779 aaKnown RBP21.06■□□□□ 0.96
PTPN4-208ENST00000460289 TMBIM1Q969X1 311 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 PPP3R2Q96LZ3 170 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 AMDHD1Q96NU7 426 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 COL21A1Q96P44 957 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 ZIM3Q96PE6 472 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 REEP4Q9H6H4 257 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 PNPLA3Q9NST1 481 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 C19orf53Q9UNZ5 99 aaPredicted RBP21.06■□□□□ 0.96
PTPN4-208ENST00000460289 ACTL7BQ9Y614 415 aa21.06■□□□□ 0.96
PTPN4-208ENST00000460289 NINQ8N4C6 2090 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 TMEM114B3SHH9 223 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 TM9SF1O15321 606 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 BIRC5O15392 142 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 TBX19O60806 448 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 UGT2B11O75310 529 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 MYZAPP0CAP1 466 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 MAPK1P28482 360 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 ASMTP46597 345 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 CORO7P57737 925 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 ZNF585AQ6P3V2 769 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 TMEM107Q6UX40 140 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 NCCRP1Q6ZVX7 275 aaPredicted RBP21.05■□□□□ 0.96
PTPN4-208ENST00000460289 ACAD11Q709F0 780 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 OR5M9Q8NGP3 310 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 NEIL3Q8TAT5 605 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 PPCDCQ96CD2 204 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 NTNG2Q96CW9 530 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 SLC35A4Q96G79 324 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 GNRHR2Q96P88 292 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 TSSK3Q96PN8 268 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 NODALQ96S42 347 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 RUBCNLQ9H714 662 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 DDX18Q9NVP1 670 aaKnown RBP21.05■□□□□ 0.96
PTPN4-208ENST00000460289 KLRF1Q9NZS2 232 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 ZDHHC2Q9UIJ5 367 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 DNAJC13O75165 2243 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 PCNX1Q96RV3 2341 aa21.05■□□□□ 0.96
PTPN4-208ENST00000460289 HNRNPRO43390 633 aaKnown RBP21.04■□□□□ 0.96
PTPN4-208ENST00000460289 TRAPPC6AO75865 159 aa21.04■□□□□ 0.96
PTPN4-208ENST00000460289 IFI6P09912 130 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms