RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 IL20RAQ9UHF4 553 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 STRCQ7RTU9 1775 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 C9J4A7 227 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ZNF195O14628 629 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 RGS9O75916 674 aaPredicted RBP13.99□□□□□ -0.17
PTPRU-205ENST00000460170 NUDT7P0C024 238 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 PIM1P11309 404 aaPredicted RBP13.99□□□□□ -0.17
PTPRU-205ENST00000460170 AP2S1P53680 142 aaPredicted RBP13.99□□□□□ -0.17
PTPRU-205ENST00000460170 PRAMEF17Q5VTA0 474 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 FAM86B1Q8N7N1 296 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 PINK1Q9BXM7 581 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 OR51E2Q9H255 320 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ZBTB20Q9HC78 741 aaPredicted RBP13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ACOT13Q9NPJ3 140 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ECM29Q5VYK3 1845 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 C5orf51A6NDU8 294 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 APBB3O95704 486 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 DPP6P42658 865 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 CDKN2CP42773 168 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 DHPSP49366 369 aaPredicted RBP13.99□□□□□ -0.17
PTPRU-205ENST00000460170 SCGB2B2Q4G0G5 96 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ANKLE1Q8NAG6 615 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 OR8K3Q8NH51 312 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ZFYVE21Q9BQ24 234 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 ABCG5Q9H222 651 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 CNIH4Q9P003 139 aa13.99□□□□□ -0.17
PTPRU-205ENST00000460170 TRBV2A0A0J9YWF9 115 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 A0A1B0GVG6 124 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 NR2C1P13056 603 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 POLR2IP36954 125 aaKnown RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 SLC6A9P48067 706 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 ACTA2P62736 377 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 ACTG2P63267 376 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 ALG10BQ5I7T1 473 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 NCCRP1Q6ZVX7 275 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 GAREM2Q75VX8 874 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 RTL10Q7L3V2 364 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 Q8N9G6 341 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 GAB3Q8WWW8 586 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 AKAP1Q92667 903 aaKnown RBP eCLIP13.98□□□□□ -0.173e-11■■■■□ 22
PTPRU-205ENST00000460170 SCN9AQ15858 1988 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 PCDH17O14917 1159 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 CYP17A1P05093 508 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 GSTT2P0CG29 244 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 C21orf33P30042 268 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 C6orf183Q5T699 404 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 TMEM17Q86X19 198 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 OR2L3Q8NG85 312 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 OR9A2Q8NGT5 310 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 FKBP10Q96AY3 582 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 ITPKCQ96DU7 683 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 SHDQ96IW2 340 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 TEX37Q96LM6 180 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 GPR174Q9BXC1 333 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 GPN2Q9H9Y4 310 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 TRPV4Q9HBA0 871 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 LOXHD1Q8IVV2 1947 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 C11orf98E9PRG8 122 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 FOXE1O00358 373 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 JUNDP17535 347 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 IMPA1P29218 277 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 FAM189A2Q15884 450 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 KCTD18Q6PI47 426 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 ZFP90Q8TF47 636 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 SAMD8Q96LT4 415 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 NAA50Q9GZZ1 169 aaKnown RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 APOBEC3BQ9UH17 382 aaKnown RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 TMEM14AQ9Y6G1 99 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 LILRB3O75022 631 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 GATBO75879 557 aaKnown RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 CFIP05156 583 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 ITGA3P26006 1051 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 CA5AP35218 305 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 EIF1AXP47813 144 aaKnown RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 GAS6Q14393 721 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 APOOQ9BUR5 198 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 METTL7AQ9H8H3 244 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 GDE1Q9NZC3 331 aa13.98□□□□□ -0.17
PTPRU-205ENST00000460170 CNOT2Q9NZN8 540 aaKnown RBP13.98□□□□□ -0.17
PTPRU-205ENST00000460170 A0A1W2PQL4 384 aaPredicted RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 WRBO00258 174 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 APOFQ13790 326 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 SMN1Q16637 294 aaKnown RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 RASGRP3Q8IV61 690 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 METTL4Q8N3J2 472 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 FCAMRQ8WWV6 532 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 TMEM234Q8WY98 164 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 SERINC2Q96SA4 455 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 ORAI3Q9BRQ5 295 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 SRA1Q9HD15 236 aaKnown RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 MAU2Q9Y6X3 613 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 GPR89AB7ZAQ6 455 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 FRS3O43559 492 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 ABLIM3O94929 683 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 CYB5AP00167 134 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 GPR89BP0CG08 455 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 RBM34P42696 430 aaKnown RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 CD97P48960 835 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 TRA2BP62995 288 aaKnown RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 SCRN3Q0VDG4 424 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms